RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 RETP07949 1114 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 ADRA2AP08913 450 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 ENGP17813 658 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 PREPP48147 710 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 GPM6BQ13491 265 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 TTLL9Q3SXZ7 439 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 OR2T5Q6IEZ7 315 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 SHQ1Q6PI26 577 aaKnown RBP11.97□□□□□ -0.49
LINC00959-201ENST00000456581 TRIM46Q7Z4K8 759 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 KIAA0907Q7Z7F0 614 aaPredicted RBP11.97□□□□□ -0.49
LINC00959-201ENST00000456581 OR2T29Q8NH02 315 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 APH1BQ8WW43 257 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 LGALS12Q96DT0 336 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 HSH2DQ96JZ2 352 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 REXO4Q9GZR2 422 aaKnown RBP11.97□□□□□ -0.49
LINC00959-201ENST00000456581 C6orf62Q9GZU0 229 aaPredicted RBP11.97□□□□□ -0.49
LINC00959-201ENST00000456581 AASDHPPTQ9NRN7 309 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 KIF17Q9P2E2 1029 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 IL36AQ9UHA7 158 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 IGLV3-16A0A075B6K0 115 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 GRXCR2A6NFK2 248 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 FAM220BPB1ANY3 271 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 DBTP11182 482 aaKnown RBP11.96□□□□□ -0.49
LINC00959-201ENST00000456581 CD40LGP29965 261 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 PBLDP30039 288 aaPredicted RBP11.96□□□□□ -0.49
LINC00959-201ENST00000456581 VIPR1P32241 457 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 TGFBR2P37173 567 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 NNMTP40261 264 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 POLR2LP62875 67 aaKnown RBP11.96□□□□□ -0.49
LINC00959-201ENST00000456581 CCSMST1Q4G0I0 132 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 NEK5Q6P3R8 708 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 BRAT1Q6PJG6 821 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 NLGN4XQ8N0W4 816 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 REXO5Q96IC2 774 aaKnown RBP11.96□□□□□ -0.49
LINC00959-201ENST00000456581 RDH12Q96NR8 316 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 MTERF1Q99551 399 aaKnown RBP11.96□□□□□ -0.49
LINC00959-201ENST00000456581 IGFLR1Q9H665 355 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 THG1LQ9NWX6 298 aaKnown RBP11.96□□□□□ -0.49
LINC00959-201ENST00000456581 SLC22A14Q9Y267 594 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 DOCK8Q8NF50 2099 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 LOC100506127A0A0U1RQW1 187 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 SLC28A1O00337 649 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 AP3D1O14617 1153 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 CLDN9O95484 217 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 HNRNPA1P09651 372 aaKnown RBP eCLIP11.96□□□□□ -0.49
LINC00959-201ENST00000456581 OR56A5P0C7T3 313 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 XPAP23025 273 aaPredicted RBP11.96□□□□□ -0.49
LINC00959-201ENST00000456581 RYKP34925 604 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 CRYBA2P53672 197 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 IFITM2Q01629 132 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 ABRQ12979 859 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 MAD2L1BPQ15013 274 aaPredicted RBP11.96□□□□□ -0.49
LINC00959-201ENST00000456581 HIST2H2ACQ16777 129 aaPredicted RBP11.96□□□□□ -0.49
LINC00959-201ENST00000456581 PLEKHG7Q6ZR37 379 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 HIPK1Q86Z02 1210 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 NPAS3Q8IXF0 933 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 USP7Q93009 1102 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 PANX1Q96RD7 426 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 TMEM121BQ9BXQ6 578 aaPredicted RBP11.96□□□□□ -0.49
LINC00959-201ENST00000456581 DUSP21Q9H596 190 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 ELOVL6Q9H5J4 265 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 KRT84Q9NSB2 600 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 ATAD3AQ9NVI7 634 aa11.96□□□□□ -0.49
LINC00959-201ENST00000456581 YBX2Q9Y2T7 364 aaKnown RBP11.96□□□□□ -0.49
LINC00959-201ENST00000456581 A8MV72 311 aaPredicted RBP11.96□□□□□ -0.5
LINC00959-201ENST00000456581 TSPAN6O43657 245 aa11.96□□□□□ -0.5
LINC00959-201ENST00000456581 WDR47O94967 919 aa11.96□□□□□ -0.5
LINC00959-201ENST00000456581 CCDC159P0C7I6 412 aa11.96□□□□□ -0.5
LINC00959-201ENST00000456581 RPP38P78345 283 aaKnown RBP11.96□□□□□ -0.5
LINC00959-201ENST00000456581 ACOX1Q15067 660 aa11.96□□□□□ -0.5
LINC00959-201ENST00000456581 PTCHD3Q3KNS1 767 aa11.96□□□□□ -0.5
LINC00959-201ENST00000456581 ZNF805Q5CZA5 627 aa11.96□□□□□ -0.5
LINC00959-201ENST00000456581 KDM4DQ6B0I6 523 aa11.96□□□□□ -0.5
LINC00959-201ENST00000456581 GET4Q7L5D6 327 aaPredicted RBP11.96□□□□□ -0.5
LINC00959-201ENST00000456581 HORMAD1Q86X24 394 aa11.96□□□□□ -0.5
LINC00959-201ENST00000456581 TMEM132CQ8N3T6 1108 aa11.96□□□□□ -0.5
LINC00959-201ENST00000456581 CELF5Q8N6W0 485 aaKnown RBP11.96□□□□□ -0.5
LINC00959-201ENST00000456581 CELF2-AS1Q8N7Q2 184 aa11.96□□□□□ -0.5
LINC00959-201ENST00000456581 FGF13Q92913 245 aa11.96□□□□□ -0.5
LINC00959-201ENST00000456581 ASPSCR1Q9BZE9 553 aa11.96□□□□□ -0.5
LINC00959-201ENST00000456581 KCNH6Q9H252 994 aa11.96□□□□□ -0.5
LINC00959-201ENST00000456581 RLIMQ9NVW2 624 aa11.96□□□□□ -0.5
LINC00959-201ENST00000456581 MARK1Q9P0L2 795 aa11.96□□□□□ -0.5
LINC00959-201ENST00000456581 EFCAB9A8MZ26 197 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 C5orf67F2Z3F1 127 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 SPINT1O43278 529 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 RGS10O43665 173 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 FGF19O95750 216 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 ANXA5P08758 320 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 POU2F1P14859 743 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 HOXB9P17482 250 aaPredicted RBP11.95□□□□□ -0.5
LINC00959-201ENST00000456581 OR1E2P47887 323 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 GAB4Q2WGN9 574 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 STEAP3Q658P3 488 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 ATG9BQ674R7 924 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 FAM180BQ6P0A1 224 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 LIPIQ6XZB0 460 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 PTOV1Q86YD1 416 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 PLD3Q8IV08 490 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 ENTHD1Q8IYW4 607 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms