RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 AP2S1P53680 142 aaPredicted RBP4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 WNT3P56703 355 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 CLDN8P56748 225 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 EEFSECP57772 596 aaKnown RBP4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 VSX2P58304 361 aaPredicted RBP4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 KCNC3Q14003 757 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 UGT8Q16880 541 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 DUOXA1Q1HG43 343 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 ZNF181Q2M3W8 571 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 C2orf68Q2NKX9 166 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 KANK2Q63ZY3 851 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 PSAPL1Q6NUJ1 521 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 CDPF1Q6NVV7 123 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 FAHD1Q6P587 224 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 SEZ6L2Q6UXD5 910 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 LRRTM3Q86VH5 581 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 FNDC5Q8NAU1 212 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 EEF1AKMT1Q8WVE0 214 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 FGF11Q92914 225 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 SLC30A2Q9BRI3 323 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 NTMT1Q9BV86 223 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 GON7Q9BXV9 100 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 ULBP1Q9BZM6 244 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 FAM96AQ9H5X1 160 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 NDUFAF4Q9P032 175 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 GINS2Q9Y248 185 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 WBP11Q9Y2W2 641 aaKnown RBP4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 LYVE1Q9Y5Y7 322 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 ZNF831Q5JPB2 1677 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 VWA8A3KMH1 1905 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 MN1Q10571 1320 aaPredicted RBP4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 PATJQ8NI35 1801 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 AKAP6Q13023 2319 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 LINC00862A6NCI5 91 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 MROH6A6NGR9 719 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 GLTPD2A6NH11 291 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 TRPC5OSA6NMA1 111 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 HRO43593 1189 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 C1QBP02746 253 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 SEMG1P04279 462 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 ANXA6P08133 673 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 PTHLHP12272 177 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 TALDO1P37837 337 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 TAGLNQ01995 201 aaKnown RBP4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 TRAF3Q13114 568 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 PUM1Q14671 1186 aaKnown RBP eCLIP4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 MBTPS1Q14703 1052 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 TBCEQ15813 527 aaPredicted RBP4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 AP5B1Q2VPB7 878 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 MFSD14CQ5VZR4 134 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 MSANTD2Q6P1R3 559 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 SBSNQ6UWP8 590 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 CEACAM20Q6UY09 585 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 ZNF683Q8IZ20 524 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 CLECL1Q8IZS7 167 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 TTC29Q8NA56 475 aaPredicted RBP4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 ZNF485Q8NCK3 441 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 OR10Z1Q8NGY1 313 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 CHURC1Q8WUH1 139 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 GPR20Q99678 358 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 PIP5K1AQ99755 562 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 SEMA4CQ9C0C4 833 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 FAM83DQ9H4H8 585 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 ATP13A1Q9HD20 1204 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 C3orf18Q9UK00 162 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 FNDC3AQ9Y2H6 1198 aaKnown RBP4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 ARIH1Q9Y4X5 557 aaPredicted RBP4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 PCDHGA2Q9Y5H1 932 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 CADP27708 2225 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 KHNYNO15037 678 aaKnown RBP4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 SLC7A4O43246 635 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 TSC22D2O75157 780 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 KATNA1O75449 491 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 NMBP08949 121 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 LTA4HP09960 611 aaKnown RBP4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 GRK3P35626 688 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 KCNQ1P51787 676 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 GABARAPL2P60520 117 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 PSPHP78330 225 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 OC90Q02509 493 aaPredicted RBP4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 CHRNB3Q05901 458 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 CDH17Q12864 832 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 IKZF1Q13422 519 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 INPP5AQ14642 412 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 GRK1Q15835 563 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 TAF12Q16514 161 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 SCD5Q86SK9 330 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 TMPRSS11BQ86T26 416 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 METTL23Q86XA0 190 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 SHISA5Q8N114 240 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 ZNF687Q8N1G0 1237 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 OR4D9Q8NGE8 314 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 ST8SIA4Q92187 359 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 TRIM63Q969Q1 353 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 SIPA1Q96FS4 1042 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 EXOC2Q96KP1 924 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 TSSK3Q96PN8 268 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 FICDQ9BVA6 458 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 RNF121Q9H920 327 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 DDIT4Q9NX09 232 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms