RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 KCNMB4Q86W47 210 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 DCUN1D3Q8IWE4 304 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 IQCKQ8N0W5 287 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 MPP5Q8N3R9 675 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 RNF10Q8N5U6 811 aaKnown RBP4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 OTUD6BQ8N6M0 293 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 PPFIBP2Q8ND30 876 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 OR2L3Q8NG85 312 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 OR2A1Q8NGT9 310 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 DENND1AQ8TEH3 1009 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 CHAC2Q8WUX2 184 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 DLG3Q92796 817 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 ZUFSPQ96AP4 578 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 RAD51AP1Q96B01 352 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 THOC3Q96J01 351 aaKnown RBP4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 CNDP1Q96KN2 507 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 BIRC8Q96P09 236 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 IP6K3Q96PC2 410 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 C17orf62Q9BQA9 187 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 SELENOSQ9BQE4 189 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 PLCD4Q9BRC7 762 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 DPH7Q9BTV6 452 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 JAM3Q9BX67 310 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 TSSK1BQ9BXA7 367 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 CHRNA10Q9GZZ6 450 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 ILKAPQ9H0C8 392 aaPredicted RBP4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 P2RY12Q9H244 342 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 LZTFL1Q9NQ48 299 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 TREX1Q9NSU2 369 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 SYBUQ9NX95 663 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 PLA2G3Q9NZ20 509 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 PAK5Q9P286 719 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 RIMKLBQ9ULI2 386 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 SRPK3Q9UPE1 567 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 DRG1Q9Y295 367 aaKnown RBP4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 HS3ST3B1Q9Y662 390 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 CPAMD8Q8IZJ3 1885 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 OR2W5A6NFC9 320 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 WIPF3A6NGB9 483 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 VSTM2BA6NLU5 285 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 TARM1B6A8C7 271 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 F8W8V4 182 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 H0YGG7 62 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 GOLGA8MH3BSY2 632 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 LRRTM2O43300 516 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 CEP104O60308 925 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 KDM1AO60341 852 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 SRPX2O60687 465 aaPredicted RBP4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 ZNF189O75820 626 aaPredicted RBP4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 WISP2O76076 250 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 MATN4O95460 622 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 ONECUT2O95948 504 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 LDLRP01130 860 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 FGGP02679 453 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 RPN2P04844 631 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 ALPPP05187 535 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 CELA2AP08217 269 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 CD63P08962 238 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 PIM1P11309 404 aaPredicted RBP4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 FUT4P22083 530 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 RPS3P23396 243 aaKnown RBP eCLIP4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 GRK2P25098 689 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 GRK3P35626 688 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 DCTP40126 519 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 NPY2RP49146 381 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 TTPAP49638 278 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 SOX8P57073 446 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 ARF3P61204 181 aaPredicted RBP4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 MAT1AQ00266 395 aaKnown RBP4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 OCA2Q04671 838 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 KLC1Q07866 573 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 CDC16Q13042 620 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 CTBP1Q13363 440 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 KCNJ11Q14654 390 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 TMED2Q15363 201 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 TESK1Q15569 626 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 RBBP7Q16576 425 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 CCNG2Q16589 344 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 HKDC1Q2TB90 917 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 KLHL38Q2WGJ6 581 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 FAM214AQ32MH5 1076 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 TUBB8Q3ZCM7 444 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 ACSBG2Q5FVE4 666 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 TCTE1Q5JU00 501 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 AGAP7PQ5VUJ5 663 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 ANKRD22Q5VYY1 191 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 B3GNTL1Q67FW5 361 aaPredicted RBP4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 LRRC8BQ6P9F7 803 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 TTC23LQ6PF05 361 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 CENPUQ71F23 418 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 NLRP9Q7RTR0 991 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 SDCCAG8Q86SQ7 713 aaPredicted RBP4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 HPS6Q86YV9 775 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 PLD3Q8IV08 490 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 DENND6AQ8IWF6 608 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 TTC29Q8NA56 475 aaPredicted RBP4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 NUP43Q8NFH3 380 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 OR11G2Q8NGC1 345 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms