RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 MYOCQ99972 504 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 FZD3Q9NPG1 666 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 GPR34Q9UPC5 381 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 RUVBL1Q9Y265 456 aaKnown RBP10.31□□□□□ -0.76
PKP4-206ENST00000452162 CA5BQ9Y2D0 317 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 PCDH15Q96QU1 1955 aa10.31□□□□□ -0.76
PKP4-206ENST00000452162 MYOCOSA0A1B0GUC4 107 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 ELOVL7A1L3X0 281 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 BCAT2O15382 392 aaPredicted RBP10.3□□□□□ -0.76
PKP4-206ENST00000452162 VEGFDO43915 354 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 PRSS23O95084 383 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 ETHE1O95571 254 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 PAK4O96013 591 aaPredicted RBP10.3□□□□□ -0.76
PKP4-206ENST00000452162 ZNF806P0C7X5 589 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 PABPC4LP0CB38 370 aaKnown RBP10.3□□□□□ -0.76
PKP4-206ENST00000452162 RAP2AP10114 183 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 TBPL1P62380 186 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 RPS21P63220 83 aaKnown RBP10.3□□□□□ -0.76
PKP4-206ENST00000452162 UGT8Q16880 541 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 TRIM61Q5EBN2 209 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 ADNP2Q6IQ32 1131 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 KIAA1161Q6NSJ0 714 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 IYDQ6PHW0 289 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 C11orf96Q7Z7L8 435 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 ANKRD46Q86W74 232 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 LRRC56Q8IYG6 542 aaPredicted RBP10.3□□□□□ -0.76
PKP4-206ENST00000452162 C10orf111Q8N326 155 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 TMEM132CQ8N3T6 1108 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 FAM86B1Q8N7N1 296 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 PLA2G15Q8NCC3 412 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 OR2L2Q8NH16 312 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 CXorf40AQ8TE69 158 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 FIG4Q92562 907 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 NEIL2Q969S2 332 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 WDR34Q96EX3 536 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 AURKBQ96GD4 344 aaPredicted RBP10.3□□□□□ -0.76
PKP4-206ENST00000452162 COX14Q96I36 57 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 SLC6A18Q96N87 628 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 SGPP1Q9BX95 441 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 MRPS26Q9BYN8 205 aaKnown RBP10.3□□□□□ -0.76
PKP4-206ENST00000452162 TM9SF3Q9HD45 589 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 RXFP3Q9NSD7 469 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 PADI4Q9UM07 663 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 PCDHGA11Q9Y5H2 935 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 UPK1AO00322 258 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 CXCR6O00574 342 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 EI24O14681 340 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 GSTA4O15217 222 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 CLOCKO15516 846 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 LRP3O75074 770 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 GMNNO75496 209 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 POP7O75817 140 aaKnown RBP10.3□□□□□ -0.76
PKP4-206ENST00000452162 SCELO95171 688 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 PGM3O95394 542 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 CFIP05156 583 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 TFAP2AP05549 437 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 ACADLP28330 430 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 KIR3DL1P43629 444 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 CSNK1EP49674 416 aaKnown RBP10.3□□□□□ -0.76
PKP4-206ENST00000452162 PNLIPRP1P54315 467 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 WNT3P56703 355 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 RAE1P78406 368 aaKnown RBP10.3□□□□□ -0.76
PKP4-206ENST00000452162 DDX39BQ13838 428 aaKnown RBP10.3□□□□□ -0.76
PKP4-206ENST00000452162 CSRP2Q16527 193 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 DUOXA1Q1HG43 343 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 DPY19L1Q2PZI1 675 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 FAM98BQ52LJ0 330 aaKnown RBP10.3□□□□□ -0.76
PKP4-206ENST00000452162 OR4F3Q6IEY1 312 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 CAPN13Q6MZZ7 669 aaPredicted RBP10.3□□□□□ -0.76
PKP4-206ENST00000452162 CRTC3Q6UUV7 619 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 ADAMTSL4Q6UY14 1074 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 GCNT7Q6ZNI0 430 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 GPR180Q86V85 440 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 OR7G3Q8NG95 312 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 OR7A2PQ8NGA2 310 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 OR9A1PQ8NGU1 263 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 HM13Q8TCT9 377 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 GFM2Q969S9 779 aaKnown RBP10.3□□□□□ -0.76
PKP4-206ENST00000452162 HIC2Q96JB3 615 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 TBCDQ9BTW9 1192 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 SLC17A9Q9BYT1 436 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 DPEP2Q9H4A9 486 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 NTN4Q9HB63 628 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 SH2B3Q9UQQ2 575 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 PCYT1BQ9Y5K3 369 aaPredicted RBP10.3□□□□□ -0.76
PKP4-206ENST00000452162 KCNE2Q9Y6J6 123 aa10.3□□□□□ -0.76
PKP4-206ENST00000452162 CROCCQ5TZA2 2017 aa10.29□□□□□ -0.76
PKP4-206ENST00000452162 RNF103-CHMP3A0A140T963 221 aa10.29□□□□□ -0.76
PKP4-206ENST00000452162 A0A1B0GTW7 788 aa10.29□□□□□ -0.76
PKP4-206ENST00000452162 EME2A4GXA9 379 aaPredicted RBP10.29□□□□□ -0.76
PKP4-206ENST00000452162 MGAT4DA6NG13 374 aa10.29□□□□□ -0.76
PKP4-206ENST00000452162 MAGEB17A8MXT2 336 aa10.29□□□□□ -0.76
PKP4-206ENST00000452162 SCN2BO60939 215 aa10.29□□□□□ -0.76
PKP4-206ENST00000452162 GSNP06396 782 aa10.29□□□□□ -0.76
PKP4-206ENST00000452162 GNSP15586 552 aa10.29□□□□□ -0.76
PKP4-206ENST00000452162 NPPBP16860 134 aa10.29□□□□□ -0.76
PKP4-206ENST00000452162 HOXD12P35452 270 aa10.29□□□□□ -0.76
PKP4-206ENST00000452162 SRSF11Q05519 484 aaKnown RBP10.29□□□□□ -0.76
PKP4-206ENST00000452162 ACSM2AQ08AH3 577 aa10.29□□□□□ -0.76
PKP4-206ENST00000452162 MAP7Q14244 749 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms