RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 CUL3Q13618 768 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 IMPG1Q17R60 797 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 DEFB110Q30KQ9 67 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 ADPRMQ3LIE5 342 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 GKAP1Q5VSY0 366 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-203ENST00000449049 RBM44Q6ZP01 1051 aaKnown RBP13.42□□□□□ -0.26
SHMT2-203ENST00000449049 ACAD11Q709F0 780 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 OR4N4Q8N0Y3 316 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 SLC13A3Q8WWT9 602 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 RERGQ96A58 199 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-203ENST00000449049 TUBGCP3Q96CW5 907 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 ZNF285Q96NJ3 590 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 OR52B2Q96RD2 323 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 SLC6A16Q9GZN6 736 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 AKTIPQ9H8T0 292 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 ENAMQ9NRM1 1142 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 VPS29Q9UBQ0 182 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 SLC12A4Q9UP95 1085 aa13.42□□□□□ -0.26
SHMT2-203ENST00000449049 LRIT2A6NDA9 550 aa13.41□□□□□ -0.26
SHMT2-203ENST00000449049 NDUFS4O43181 175 aa13.41□□□□□ -0.26
SHMT2-203ENST00000449049 SRPX2O60687 465 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-203ENST00000449049 CDK4P11802 303 aa13.41□□□□□ -0.26
SHMT2-203ENST00000449049 NR6A1Q15406 480 aa13.41□□□□□ -0.26
SHMT2-203ENST00000449049 LSM12Q3MHD2 195 aaKnown RBP13.41□□□□□ -0.26
SHMT2-203ENST00000449049 TMTC4Q5T4D3 741 aa13.41□□□□□ -0.26
SHMT2-203ENST00000449049 KHDRBS2Q5VWX1 349 aaKnown RBP13.41□□□□□ -0.26
SHMT2-203ENST00000449049 CDCP2Q5VXM1 449 aa13.41□□□□□ -0.26
SHMT2-203ENST00000449049 B3GNT8Q7Z7M8 397 aa13.41□□□□□ -0.26
SHMT2-203ENST00000449049 PPP3R2Q96LZ3 170 aa13.41□□□□□ -0.26
SHMT2-203ENST00000449049 TMEM74Q96NL1 305 aa13.41□□□□□ -0.26
SHMT2-203ENST00000449049 AICDAQ9GZX7 198 aa13.41□□□□□ -0.26
SHMT2-203ENST00000449049 TCF7L2Q9NQB0 619 aa13.41□□□□□ -0.26
SHMT2-203ENST00000449049 ASXL3Q9C0F0 2248 aa13.41□□□□□ -0.26
SHMT2-203ENST00000449049 NDUFAB1O14561 156 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 P2RX6O15547 441 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 SLC35G6P0C7Q6 338 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 HNRNPH1P31943 449 aaKnown RBP13.4□□□□□ -0.26
SHMT2-203ENST00000449049 CCKBRP32239 447 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 TBL3Q12788 808 aaKnown RBP13.4□□□□□ -0.26
SHMT2-203ENST00000449049 KCNAB1Q14722 419 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 SMU1Q2TAY7 513 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 MANEAQ5SRI9 462 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 PHF19Q5T6S3 580 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 DEPDC1Q5TB30 811 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 OGFOD2Q6N063 350 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 CAMKVQ8NCB2 501 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 RCBTB1Q8NDN9 531 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 CEP70Q8NHQ1 597 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 METTL2AQ96IZ6 378 aaKnown RBP13.4□□□□□ -0.26
SHMT2-203ENST00000449049 OR51B5Q9H339 312 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 NMRK1Q9NWW6 199 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 C1orf109Q9NX04 203 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 GIMAP2Q9UG22 337 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 SLC30A4O14863 429 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 PEX11AO75192 247 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 SEMA3DO95025 777 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 STATHP02808 62 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 SERPIND1P05546 499 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 FOLR1P15328 257 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 VSX2P58304 361 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-203ENST00000449049 RGS1Q08116 209 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 KIAA0040Q15053 153 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 ATP6AP1LQ52LC2 224 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 TMEM35AQ53FP2 167 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 C6orf136Q5SQH8 315 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 CHSY3Q70JA7 882 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 ZFAND4Q86XD8 727 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 ZNF655Q8N720 491 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-203ENST00000449049 CSNK1A1LQ8N752 337 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 MS4A6EQ96DS6 147 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 MACROD1Q9BQ69 325 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 LRTM1Q9HBL6 345 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 ARL2BPQ9Y2Y0 163 aa13.4□□□□□ -0.26
SHMT2-203ENST00000449049 H3BMH7 237 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 TXNDC9O14530 226 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 ZSCAN9O15535 394 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-203ENST00000449049 CTSBP07858 339 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 LBPP18428 481 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 ARFIP1P53367 373 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 STXBP1P61764 594 aaKnown RBP13.39□□□□□ -0.27
SHMT2-203ENST00000449049 AP5B1Q2VPB7 878 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 PRTGQ2VWP7 1150 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 GALNTL6Q49A17 601 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 CCDC157Q569K6 752 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 SPIN4Q56A73 249 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 SLCO6A1Q86UG4 719 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 METTL4Q8N3J2 472 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 ARHGEF39Q8N4T4 335 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 CHTF18Q8WVB6 975 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 C11orf24Q96F05 449 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-203ENST00000449049 APIPQ96GX9 242 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 FCRL1Q96LA6 429 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 F2RL3Q96RI0 385 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 MRPL1Q9BYD6 325 aaKnown RBP13.39□□□□□ -0.27
SHMT2-203ENST00000449049 REXO4Q9GZR2 422 aaKnown RBP13.39□□□□□ -0.27
SHMT2-203ENST00000449049 PRM3Q9NNZ6 103 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 SIRT5Q9NXA8 310 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 SIDT1Q9NXL6 827 aaKnown RBP13.39□□□□□ -0.27
SHMT2-203ENST00000449049 MDC1Q14676 2089 aaKnown RBP13.39□□□□□ -0.27
SHMT2-203ENST00000449049 GOLGA4Q13439 2230 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms