RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 C17orf64Q86WR6 236 aa7.77□□□□□ -1.16
CCDC39-201ENST00000442201 OR52E1Q8NGJ3 308 aa7.77□□□□□ -1.16
CCDC39-201ENST00000442201 GPBAR1Q8TDU6 330 aa7.77□□□□□ -1.16
CCDC39-201ENST00000442201 EDAQ92838 391 aa7.77□□□□□ -1.16
CCDC39-201ENST00000442201 WDR34Q96EX3 536 aa7.77□□□□□ -1.16
CCDC39-201ENST00000442201 NECAB3Q96P71 396 aaPredicted RBP7.77□□□□□ -1.16
CCDC39-201ENST00000442201 PRM3Q9NNZ6 103 aa7.77□□□□□ -1.16
CCDC39-201ENST00000442201 SDR39U1Q9NRG7 319 aaPredicted RBP7.77□□□□□ -1.16
CCDC39-201ENST00000442201 AIG1Q9NVV5 245 aa7.77□□□□□ -1.16
CCDC39-201ENST00000442201 CCDC167Q9P0B6 97 aa7.77□□□□□ -1.16
CCDC39-201ENST00000442201 KCNN3Q9UGI6 736 aa7.77□□□□□ -1.16
CCDC39-201ENST00000442201 RSL24D1Q9UHA3 163 aaKnown RBP7.77□□□□□ -1.16
CCDC39-201ENST00000442201 TAC3Q9UHF0 121 aa7.77□□□□□ -1.16
CCDC39-201ENST00000442201 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 A0A1W2PR77 199 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 A6NCN8 305 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 ZNF701M0R085 212 aaPredicted RBP7.77□□□□□ -1.17
CCDC39-201ENST00000442201 PEX1O43933 1283 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 SLC2A4P14672 509 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 BCKDHBP21953 392 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 PKLRP30613 574 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 IFNA8P32881 189 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 GRIK2Q13002 908 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 MAD2L1Q13257 205 aaPredicted RBP7.77□□□□□ -1.17
CCDC39-201ENST00000442201 LAPTM5Q13571 262 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 SLBPQ14493 270 aaKnown RBP eCLIP7.77□□□□□ -1.17
CCDC39-201ENST00000442201 HIST2H2ACQ16777 129 aaPredicted RBP7.77□□□□□ -1.17
CCDC39-201ENST00000442201 SMU1Q2TAY7 513 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 CCDC58Q4VC31 144 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 CATSPEREQ5SY80 951 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 HIST2H2AA3Q6FI13 130 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 MED27Q6P2C8 311 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 NXPE4Q6UWF7 544 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 NRROSQ86YC3 692 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 TMEFF1Q8IYR6 380 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 RBM15BQ8NDT2 890 aaKnown RBP7.77□□□□□ -1.17
CCDC39-201ENST00000442201 OR2L8Q8NGY9 312 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 HMGCLL1Q8TB92 370 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 REPS1Q96D71 796 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 PLEKHA8Q96JA3 519 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 C1orf50Q9BV19 199 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 ACPTQ9BZG2 426 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 TCEAL2Q9H3H9 227 aaPredicted RBP7.77□□□□□ -1.17
CCDC39-201ENST00000442201 XKR8Q9H6D3 395 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 ARMC7Q9H6L4 198 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 KIR3DX1Q9H7L2 352 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 LRTM1Q9HBL6 345 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 TM9SF3Q9HD45 589 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 C1orf109Q9NX04 203 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 NDE1Q9NXR1 346 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 APOBEC3BQ9UH17 382 aaKnown RBP7.77□□□□□ -1.17
CCDC39-201ENST00000442201 COL6A3P12111 3177 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 TLR4O00206 839 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 SEC22BO75396 215 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 ALX3O95076 343 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 JUNDP17535 347 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 GPX3P22352 226 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 CXCR2P25025 360 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 SLC19A1P41440 591 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 NR1H2P55055 460 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 P2RX3P56373 397 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 RPL38P63173 70 aaKnown RBP7.77□□□□□ -1.17
CCDC39-201ENST00000442201 DMWDQ09019 674 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 DDX39BQ13838 428 aaKnown RBP7.77□□□□□ -1.17
CCDC39-201ENST00000442201 DNAL1Q4LDG9 190 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 TIGD2Q4W5G0 525 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 RFTN2Q52LD8 501 aaPredicted RBP7.77□□□□□ -1.17
CCDC39-201ENST00000442201 C10orf62Q5T681 223 aaPredicted RBP7.77□□□□□ -1.17
CCDC39-201ENST00000442201 NANOGP8Q6NSW7 305 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 AAGABQ6PD74 315 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 DGLUCYQ7Z3D6 616 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 TAF8Q7Z7C8 310 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 TRIM48Q8IWZ4 208 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 LINC01555Q8NAE3 123 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 OR7G3Q8NG95 312 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 WDR20Q8TBZ3 569 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 TTC9Q92623 222 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 UBE2E3Q969T4 207 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 NRTNQ99748 197 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 C1orf21Q9H246 121 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 MOV10Q9HCE1 1003 aaKnown RBP7.77□□□□□ -1.17
CCDC39-201ENST00000442201 TAAR2Q9P1P5 351 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 ZNF624Q9P2J8 865 aaPredicted RBP7.77□□□□□ -1.17
CCDC39-201ENST00000442201 KLF15Q9UIH9 416 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 SH2B3Q9UQQ2 575 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 EIF3LQ9Y262 564 aaKnown RBP7.77□□□□□ -1.17
CCDC39-201ENST00000442201 PCDHGA3Q9Y5H0 932 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 GPR45Q9Y5Y3 372 aa7.77□□□□□ -1.17
CCDC39-201ENST00000442201 ZFC3H1O60293 1989 aaKnown RBP7.76□□□□□ -1.17
CCDC39-201ENST00000442201 TRBV23OR9-2A0A075B6M9 112 aa7.76□□□□□ -1.17
CCDC39-201ENST00000442201 PRAMEF33A0A0G2JMD5 474 aa7.76□□□□□ -1.17
CCDC39-201ENST00000442201 SERTM1A2A2V5 107 aa7.76□□□□□ -1.17
CCDC39-201ENST00000442201 OR5K4A6NMS3 321 aa7.76□□□□□ -1.17
CCDC39-201ENST00000442201 B8ZZF3 427 aa7.76□□□□□ -1.17
CCDC39-201ENST00000442201 KRT75O95678 551 aa7.76□□□□□ -1.17
CCDC39-201ENST00000442201 WNT1P04628 370 aa7.76□□□□□ -1.17
CCDC39-201ENST00000442201 CDH1P12830 882 aa7.76□□□□□ -1.17
CCDC39-201ENST00000442201 HSD3B1P14060 373 aa7.76□□□□□ -1.17
CCDC39-201ENST00000442201 HOXB1P14653 301 aaPredicted RBP7.76□□□□□ -1.17
CCDC39-201ENST00000442201 CFL1P23528 166 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms