RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 KCTD11Q693B1 232 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 RWDD4Q6NW29 188 aaKnown RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 ZNF549Q6P9A3 640 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 CES3Q6UWW8 571 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 C16orf89Q6UX73 402 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 SLC24A5Q71RS6 500 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 CTU1Q7Z7A3 348 aaKnown RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 TAC4Q86UU9 113 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 KCNMB4Q86W47 210 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 LRRC49Q8IUZ0 686 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 ARID3BQ8IVW6 561 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 SCN4BQ8IWT1 228 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 NUP93Q8N1F7 819 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 ARHGAP18Q8N392 663 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 NPWQ8N729 165 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 OR10T2Q8NGX3 314 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 METTL6Q8TCB7 284 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 URGCPQ8TCY9 931 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 PPP4R1Q8TF05 950 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 ZFPM2Q8WW38 1151 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 SLC25A28Q96A46 364 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 TBC1D31Q96DN5 1066 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 REXO5Q96IC2 774 aaKnown RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 CELF6Q96J87 481 aaKnown RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 C1orf74Q96LT6 269 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 RILPQ96NA2 401 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 AGAP3Q96P47 875 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 NR1H4Q96RI1 486 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 RBBP8Q99708 897 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 BTBD10Q9BSF8 475 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 KIFC1Q9BW19 673 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 SLC39A8Q9C0K1 460 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 IL22Q9GZX6 179 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 WWP1Q9H0M0 922 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 MUC13Q9H3R2 512 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 CDCP1Q9H5V8 836 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAM96AQ9H5X1 160 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 TLE6Q9H808 572 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 SAP30LQ9HAJ7 183 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 TLR8Q9NR97 1041 aaKnown RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 C20orf96Q9NUD7 363 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 TAS2R10Q9NYW0 307 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 BAG5Q9UL15 447 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 VANGL2Q9ULK5 521 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 ABT1Q9ULW3 272 aaKnown RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 VPS4AQ9UN37 437 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 CAMK2AQ9UQM7 478 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 AAR2Q9Y312 384 aaKnown RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 SNX10Q9Y5X0 201 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 PSAT1Q9Y617 370 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 MGAMO43451 1857 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 MCM3APO60318 1980 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 EVPLQ92817 2033 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 A0A096LPK6 155 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 KIR2DS5A0A0G2JLQ3 304 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 ZCWPW2A0A1B0GU75 182 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 AGAP5A6NIR3 686 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 A8MUI8 341 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 TMEM114B3SHH9 223 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 SPECC1L-ADORA2AF8WAN1 911 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 TMEM189-UBE2V1I3L0A0 370 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 KIR2DS3K7RE56 304 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 GTPBP1O00178 669 aaKnown RBP3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 SYN3O14994 580 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 GYG2O15488 501 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 CACNG3O60359 315 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 UGDHO60701 494 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 NEBLO76041 1014 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 KLHL2O95198 593 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 CBX6O95503 412 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 ALDOAP04075 364 aaKnown RBP3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 SERPINE1P05121 402 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 APOA4P06727 396 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 SERPINA6P08185 405 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 OR4Q2P0C623 313 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 RALBP11234 206 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 FGF3P11487 239 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 PEPDP12955 493 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 CPA3P15088 417 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 IL11P20809 199 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 DNAJB1P25685 340 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 NMBRP28336 390 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 HOXD10P28358 340 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 MAGEA12P43365 314 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 OR1G1P47890 313 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 HARS2P49590 506 aaKnown RBP3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 LIMK2P53671 638 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 GEMP55040 296 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 AQP5P55064 265 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 FOXL2P58012 376 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 RPL10AP62906 217 aaKnown RBP3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 IRX4P78413 519 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 SP3Q02447 781 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 DSC1Q08554 894 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 TBL3Q12788 808 aaKnown RBP3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 OLIG2Q13516 323 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 TDGQ13569 410 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 PCLAFQ15004 111 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 E2F5Q15329 346 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 UGP2Q16851 508 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms