RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 PDSS2Q86YH6 399 aa22.4■■□□□ 1.18
VARS-217ENST00000440048 ZC3H7AQ8IWR0 971 aaKnown RBP22.4■■□□□ 1.18
VARS-217ENST00000440048 MESP1Q9BRJ9 268 aa22.4■■□□□ 1.18
VARS-217ENST00000440048 NUDT9Q9BW91 350 aa22.4■■□□□ 1.18
VARS-217ENST00000440048 CAPS2Q9BXY5 557 aa22.4■■□□□ 1.18
VARS-217ENST00000440048 IDSB3KWA1 339 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 KLHL18O94889 574 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 KLHL2O95198 593 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 FAM153BP0C7A2 387 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 GLRBP48167 497 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 RGS1Q08116 209 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 RAPSNQ13702 412 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 FAM153CQ494X1 144 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 TRMT10CQ7L0Y3 403 aaKnown RBP22.39■■□□□ 1.17
VARS-217ENST00000440048 TAOK1Q7L7X3 1001 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 SHISA5Q8N114 240 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 AFAP1L2Q8N4X5 818 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 SNX31Q8N9S9 440 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 OR11G2Q8NGC1 345 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 RHEBL1Q8TAI7 183 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 DCAKDQ8WVC6 231 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 ISL2Q96A47 359 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 CD244Q9BZW8 370 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 VPS11Q9H270 941 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 ATP13A2Q9NQ11 1180 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 GPR83Q9NYM4 423 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 HCN3Q9P1Z3 774 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 G3BP2Q9UN86 482 aaKnown RBP22.39■■□□□ 1.17
VARS-217ENST00000440048 NAALAD2Q9Y3Q0 740 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 ASB1Q9Y576 335 aa22.39■■□□□ 1.17
VARS-217ENST00000440048 SETXQ7Z333 2677 aaKnown RBP22.39■■□□□ 1.17
VARS-217ENST00000440048 RP1L1Q8IWN7 2480 aaPredicted RBP22.38■■□□□ 1.17
VARS-217ENST00000440048 CLGNO14967 610 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 CCNT2O60583 730 aaKnown RBP22.38■■□□□ 1.17
VARS-217ENST00000440048 PRAMEF4O60810 478 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 ALOX12BO75342 701 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 BMP10O95393 424 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 HEXBP07686 556 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 ABHD2P08910 425 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 MTHFD2P13995 350 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 CXCR2P25025 360 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 MAGEA12P43365 314 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 AGTR2P50052 363 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 KLRB1Q12918 225 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 SLBPQ14493 270 aaKnown RBP eCLIP22.38■■□□□ 1.17
VARS-217ENST00000440048 HERC3Q15034 1050 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 ACAP2Q15057 778 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 PDK4Q16654 411 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 TUBB8Q3ZCM7 444 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 PRAMEF9Q5VWM5 478 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 GALNT16Q8N428 558 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 TRPV3Q8NET8 790 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 OR51Q1Q8NH59 317 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 CREB3L4Q8TEY5 395 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 GPR78Q96P69 363 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 ZNF180Q9UJW8 692 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 ANAPC2Q9UJX6 822 aa22.38■■□□□ 1.17
VARS-217ENST00000440048 ASH1LQ9NR48 2969 aaKnown RBP22.38■■□□□ 1.17
VARS-217ENST00000440048 CCDC189A1A4V9 331 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 SYCE1LA8MT33 242 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 RIPK2O43353 540 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 RDH16O75452 317 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 JRKO75564 520 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 KRT38O76015 456 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 ZNF888P0CJ79 500 aaPredicted RBP22.37■■□□□ 1.17
VARS-217ENST00000440048 ALOX12P18054 663 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 EPORP19235 508 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 CNTFP26441 200 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 SOX8P57073 446 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 AIMP2Q13155 320 aaKnown RBP22.37■■□□□ 1.17
VARS-217ENST00000440048 COLEC12Q5KU26 742 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 TMIGD1Q6UXZ0 262 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 LRRC70Q7Z2Q7 622 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.37■■□□□ 1.17
VARS-217ENST00000440048 GSPT2Q8IYD1 628 aaKnown RBP22.37■■□□□ 1.17
VARS-217ENST00000440048 PLD6Q8N2A8 252 aaKnown RBP22.37■■□□□ 1.17
VARS-217ENST00000440048 UBTD2Q8WUN7 234 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 C8orf44Q96CB5 159 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 VPS50Q96JG6 964 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 TXLNGYQ9BZA5 131 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 SLC6A16Q9GZN6 736 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 EHD1Q9H4M9 534 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 COPG2Q9UBF2 871 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 MKL2Q9ULH7 1088 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 ZNF451Q9Y4E5 1061 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 PCDHGB7Q9Y5F8 929 aa22.37■■□□□ 1.17
VARS-217ENST00000440048 SCN2AQ99250 2005 aa22.36■■□□□ 1.17
VARS-217ENST00000440048 UBR5O95071 2799 aaPredicted RBP22.36■■□□□ 1.17
VARS-217ENST00000440048 EXOC1LA0A1B0GW35 172 aa22.36■■□□□ 1.17
VARS-217ENST00000440048 ZNF860A6NHJ4 632 aa22.36■■□□□ 1.17
VARS-217ENST00000440048 MAP2K7O14733 419 aa22.36■■□□□ 1.17
VARS-217ENST00000440048 GALR3O60755 368 aaPredicted RBP22.36■■□□□ 1.17
VARS-217ENST00000440048 B3GALT4O96024 378 aa22.36■■□□□ 1.17
VARS-217ENST00000440048 ACPPP15309 386 aa22.36■■□□□ 1.17
VARS-217ENST00000440048 HNF4AP41235 474 aa22.36■■□□□ 1.17
VARS-217ENST00000440048 EFNA3P52797 238 aa22.36■■□□□ 1.17
VARS-217ENST00000440048 HYAL2Q12891 473 aa22.36■■□□□ 1.17
VARS-217ENST00000440048 MYBPC3Q14896 1274 aa22.36■■□□□ 1.17
VARS-217ENST00000440048 DEFB134Q4QY38 66 aa22.36■■□□□ 1.17
VARS-217ENST00000440048 XKR6Q5GH73 641 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms