RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 SF3B4Q15427 424 aaKnown RBP eCLIP10.16□□□□□ -0.781e-7■■■□□ 17.7
RTN4-211ENST00000438462 ERMARDQ5T6L9 678 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 KCTD11Q693B1 232 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 ZNF449Q6P9G9 518 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 IL20RBQ6UXL0 311 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 PM20D2Q8IYS1 436 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 FAM71AQ8IYT1 594 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 GCNT2Q8N0V5 402 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 ARHGEF39Q8N4T4 335 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 OR51Q1Q8NH59 317 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 SLC30A5Q8TAD4 765 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 SMAP2Q8WU79 429 aaPredicted RBP10.16□□□□□ -0.78
RTN4-211ENST00000438462 SLC44A1Q8WWI5 657 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 MAML1Q92585 1016 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 INTS12Q96CB8 462 aaKnown RBP10.16□□□□□ -0.78
RTN4-211ENST00000438462 IL17FQ96PD4 163 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 MCEEQ96PE7 176 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 TIMP4Q99727 224 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 HAUS2Q9NVX0 235 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 CIDEBQ9UHD4 219 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 PCSK1NQ9UHG2 260 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 TRHDEQ9UKU6 1024 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 SACSQ9NZJ4 4579 aa10.16□□□□□ -0.78
RTN4-211ENST00000438462 FREM3P0C091 2139 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 TRBV11-1A0A0K0K1C0 115 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 A0A0U1RQJ8 604 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 A0A1W2PP18 115 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 KDM1AO60341 852 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 B4GALT2O60909 372 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 OR6B1O95007 311 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 YEATS4O95619 227 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 AP2A1O95782 977 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 RFPL3SP0C7P2 107 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 PCK1P35558 622 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 ARL4AP40617 200 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 AVPR1BP47901 424 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 HCAR3P49019 387 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 GGTLC2Q14390 218 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 ZNF750Q32MQ0 723 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 ZDHHC20Q5W0Z9 365 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 RINLQ6ZS11 566 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 TRIM59Q8IWR1 403 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 GPALPP1Q8IXQ4 340 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 RASGEF1CQ8N431 466 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 OR9A4Q8NGU2 314 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 LILRB1Q8NHL6 650 aaPredicted RBP10.15□□□□□ -0.78
RTN4-211ENST00000438462 ASB15Q8WXK1 588 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 FAM168AQ92567 244 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 PROX1Q92786 737 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 RBMXL1Q96E39 390 aaKnown RBP10.15□□□□□ -0.78
RTN4-211ENST00000438462 CEP63Q96MT8 703 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 AARSD1Q9BTE6 412 aaKnown RBP10.15□□□□□ -0.78
RTN4-211ENST00000438462 PRR14Q9BWN1 585 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 RASSF4Q9H2L5 321 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 ZWILCHQ9H900 591 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 UNKLQ9H9P5 680 aaKnown RBP10.15□□□□□ -0.78
RTN4-211ENST00000438462 FBXW2Q9UKT8 454 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 PCDHB10Q9UN67 800 aa10.15□□□□□ -0.78
RTN4-211ENST00000438462 SAGE2PA6NJ88 616 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 SMNDC1O75940 238 aaKnown RBP eCLIP10.14□□□□□ -0.792e-15■■■□□ 16
RTN4-211ENST00000438462 THBDP07204 575 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 APEHP13798 732 aaKnown RBP10.14□□□□□ -0.79
RTN4-211ENST00000438462 POU2F1P14859 743 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 CD9P21926 228 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 ACADLP28330 430 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 SLCO1A2P46721 670 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 PCYT1AP49585 367 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 ARFIP2P53365 341 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 GSCP56915 257 aaPredicted RBP10.14□□□□□ -0.79
RTN4-211ENST00000438462 RPL7AP62424 266 aaKnown RBP10.14□□□□□ -0.79
RTN4-211ENST00000438462 KCNJ2P63252 427 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 KRT85P78386 507 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 MPP1Q00013 466 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 PTP4A2Q12974 167 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 DUSP8Q13202 625 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 ANKRD34AQ69YU3 496 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 C11orf87Q6NUJ2 197 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 DNAJC14Q6Y2X3 702 aaPredicted RBP10.14□□□□□ -0.79
RTN4-211ENST00000438462 PRSS41Q7RTY9 318 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 SNX31Q8N9S9 440 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 FAM71BQ8TC56 605 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 C10orf105Q8TEF2 133 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 DCUN1D1Q96GG9 259 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 MIPEPQ99797 713 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 MMP27Q9H306 513 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 CALHM2Q9HA72 323 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 ZNHIT6Q9NWK9 470 aaKnown RBP10.14□□□□□ -0.79
RTN4-211ENST00000438462 AMACRQ9UHK6 382 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 TMEFF2Q9UIK5 374 aaPredicted RBP10.14□□□□□ -0.79
RTN4-211ENST00000438462 ATG4BQ9Y4P1 393 aa10.14□□□□□ -0.79
RTN4-211ENST00000438462 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.14□□□□□ -0.79
RTN4-211ENST00000438462 MAGEB17A8MXT2 336 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 MSTNO14793 375 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 BUD23O43709 281 aaKnown RBP10.13□□□□□ -0.79
RTN4-211ENST00000438462 PTPN6P29350 595 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 SERPINB6P35237 376 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 SOX3P41225 446 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 OGDHQ02218 1023 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 MAN2A1Q16706 1144 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 ADAM5Q6NVV9 412 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms