RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 RTCAO00442 366 aaKnown RBP20.22■□□□□ 0.83
PTPRF-207ENST00000436724 ARPC2O15144 300 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 C1QCP02747 245 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 STATHP02808 62 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 C8BP07358 591 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 CXCR2P25025 360 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 PTX3P26022 381 aaPredicted RBP20.22■□□□□ 0.83
PTPRF-207ENST00000436724 MAOBP27338 520 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 PTPN6P29350 595 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 EEFSECP57772 596 aaKnown RBP20.22■□□□□ 0.83
PTPRF-207ENST00000436724 PHEXP78562 749 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 METTL4Q8N3J2 472 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 FAM110BQ8TC76 370 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 LRGUKQ96M69 825 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 THUMPD3Q9BV44 507 aaKnown RBP20.22■□□□□ 0.83
PTPRF-207ENST00000436724 FAM192AQ9GZU8 254 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 KCNH6Q9H252 994 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 MRPS30Q9NP92 439 aaKnown RBP20.22■□□□□ 0.83
PTPRF-207ENST00000436724 TRBV5-3A0A0A0MS03 114 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 TCRBV3S1A0A5B6 114 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 SCAMP2O15127 329 aaKnown RBP20.22■□□□□ 0.83
PTPRF-207ENST00000436724 AHCYL1O43865 530 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 SCN2BO60939 215 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 MC1RQ01726 317 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 ZNF763Q0D2J5 394 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 BNIP2Q12982 314 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 PDK3Q15120 406 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 PRR23BQ6ZRT6 265 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 LPCAT2Q7L5N7 544 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 TICAM1Q8IUC6 712 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 CLECL1Q8IZS7 167 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 OR2L3Q8NG85 312 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 ITCHQ96J02 903 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 RMND5AQ9H871 391 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 COPS7BQ9H9Q2 264 aaPredicted RBP20.22■□□□□ 0.83
PTPRF-207ENST00000436724 GPR27Q9NS67 375 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 ABCA7Q8IZY2 2146 aa20.22■□□□□ 0.83
PTPRF-207ENST00000436724 PRSS51A0A1B0GVH4 220 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 PLPP1O14494 284 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 TOR1BO14657 336 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 PRMT3O60678 531 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 C1orf61Q13536 156 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 GPR153Q6NV75 609 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 UGT2A3Q6UWM9 527 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 C10orf111Q8N326 155 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 OR8J3Q8NGG0 315 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.21■□□□□ 0.83
PTPRF-207ENST00000436724 GPBAR1Q8TDU6 330 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 SLCO4A1Q96BD0 722 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 DPH7Q9BTV6 452 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 MS4A8Q9BY19 250 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 ACTR3BQ9P1U1 418 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 MAN2B2Q9Y2E5 1009 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 ISM1B1AKI9 464 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 BTN3A3O00478 584 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 RFXANKO14593 260 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 NDUFS2O75306 463 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 SERPIND1P05546 499 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 CHRM5P08912 532 aaPredicted RBP20.21■□□□□ 0.83
PTPRF-207ENST00000436724 ASMTP46597 345 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 SRSF11Q05519 484 aaKnown RBP20.21■□□□□ 0.83
PTPRF-207ENST00000436724 CYP4F3Q08477 520 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 RUNDC3AQ59EK9 446 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 LRIF1Q5T3J3 769 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 KHDRBS2Q5VWX1 349 aaKnown RBP20.21■□□□□ 0.83
PTPRF-207ENST00000436724 KIAA1614Q5VZ46 1190 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 SLC9B2Q86UD5 537 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 TMEM126BQ8IUX1 230 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 OR8J2Q8NGG1 315 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 OR10A6Q8NH74 314 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 KLHDC7BQ96G42 594 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 ZNF583Q96ND8 569 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 NELL2Q99435 816 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 PKP2Q99959 881 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 MACROD1Q9BQ69 325 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 SIRT5Q9NXA8 310 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 TAAR2Q9P1P5 351 aa20.21■□□□□ 0.83
PTPRF-207ENST00000436724 DENRO43583 198 aaKnown RBP20.2■□□□□ 0.82
PTPRF-207ENST00000436724 STAMBPO95630 424 aa20.2■□□□□ 0.82
PTPRF-207ENST00000436724 CAPNS1P04632 268 aa20.2■□□□□ 0.82
PTPRF-207ENST00000436724 DCNP07585 359 aaKnown RBP20.2■□□□□ 0.82
PTPRF-207ENST00000436724 HOXB9P17482 250 aaPredicted RBP20.2■□□□□ 0.82
PTPRF-207ENST00000436724 NDUFS1P28331 727 aa20.2■□□□□ 0.82
PTPRF-207ENST00000436724 SHMT2P34897 504 aa20.2■□□□□ 0.82
PTPRF-207ENST00000436724 C21orf58P58505 322 aa20.2■□□□□ 0.82
PTPRF-207ENST00000436724 PLCL1Q15111 1095 aa20.2■□□□□ 0.82
PTPRF-207ENST00000436724 DPY19L1Q2PZI1 675 aa20.2■□□□□ 0.82
PTPRF-207ENST00000436724 PRRT3Q5FWE3 981 aa20.2■□□□□ 0.82
PTPRF-207ENST00000436724 DEPDC1Q5TB30 811 aa20.2■□□□□ 0.82
PTPRF-207ENST00000436724 IYDQ6PHW0 289 aa20.2■□□□□ 0.82
PTPRF-207ENST00000436724 PTRH1Q86Y79 214 aaKnown RBP20.2■□□□□ 0.82
PTPRF-207ENST00000436724 ADGRF3Q8IZF5 1079 aa20.2■□□□□ 0.82
PTPRF-207ENST00000436724 ZNF717Q9BY31 904 aaPredicted RBP20.2■□□□□ 0.82
PTPRF-207ENST00000436724 SRMSQ9H3Y6 488 aa20.2■□□□□ 0.82
PTPRF-207ENST00000436724 OR6C2Q9NZP2 312 aa20.2■□□□□ 0.82
PTPRF-207ENST00000436724 SDK1Q7Z5N4 2213 aa20.2■□□□□ 0.82
PTPRF-207ENST00000436724 A0A096LPI6 279 aa20.19■□□□□ 0.82
PTPRF-207ENST00000436724 TXNDC9O14530 226 aa20.19■□□□□ 0.82
PTPRF-207ENST00000436724 HAT1O14929 419 aa20.19■□□□□ 0.82
PTPRF-207ENST00000436724 ERN1O75460 977 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms