RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 LEUTXA8MZ59 168 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 FZD9O00144 591 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 EPOP01588 193 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 CTPS1P17812 591 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 MAN2A2P49641 1150 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 CDC42P60953 191 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 PTGES3Q15185 160 aaKnown RBP11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 GPR162Q16538 588 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 C5orf22Q49AR2 442 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 SLC35F1Q5T1Q4 408 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 TRIQKQ629K1 86 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 SAXO2Q658L1 398 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 FAM151BQ6UXP7 276 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 PMEPA1Q969W9 287 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 GABARAPL3Q9BY60 117 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 PRDM5Q9NQX1 630 aaPredicted RBP11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 DHRS7Q9Y394 339 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 TSPAN4O14817 238 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 PLD2O14939 933 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 CCNB2O95067 398 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 CTSHP09668 335 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 RPS12P25398 132 aaKnown RBP11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 HMGB2P26583 209 aaKnown RBP11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 APEX1P27695 318 aaKnown RBP11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 MLLT3P42568 568 aaPredicted RBP11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 CDH18Q13634 790 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 IQCCQ4KMZ1 466 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 MSANTD3Q96H12 275 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 C7orf34Q96L11 122 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 OPALINQ96PE5 141 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 ACBD6Q9BR61 282 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 ACAT2Q9BWD1 397 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 TPT1P8Q9HAU6 139 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 CLN6Q9NWW5 311 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 DNAJC27Q9NZQ0 273 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 SSR3Q9UNL2 185 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 PLXNA1Q9UIW2 1896 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 PSIP1O75475 530 aaKnown RBP11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 CLDN9O95484 217 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 TRAPPC2P0DI81 140 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 TRAPPC2BP0DI82 140 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 HOXB6P17509 224 aaKnown RBP11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 CRATP43155 626 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 PRIM2P49643 509 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 RGS4P49798 205 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 KCNJ10P78508 379 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 TARDBPQ13148 414 aaKnown RBP eCLIP11.14□□□□□ -0.632e-13■■□□□ 11.6
HMGCS1-202ENST00000433297 DUOXA1Q1HG43 343 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 C10orf120Q5SQS8 335 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 PRAMEF19Q5SWL8 479 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 C22orf42Q6IC83 251 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 IDO2Q6ZQW0 420 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 BCDIN3DQ7Z5W3 292 aaKnown RBP11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 CDH24Q86UP0 819 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 PLCZ1Q86YW0 608 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 TBC1D20Q96BZ9 403 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 C1orf74Q96LT6 269 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 EPYCQ99645 322 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 HHATLQ9HCP6 504 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 TLR6Q9Y2C9 796 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 PCDHGA2Q9Y5H1 932 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 DOCK1Q14185 1865 aa11.14□□□□□ -0.63
HMGCS1-202ENST00000433297 CIB4A0PJX0 185 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 ARL5CA6NH57 179 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 SNTNA6NMZ2 147 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 WASH4PA8MWX3 477 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 CBX4O00257 560 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 PCDH17O14917 1159 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 PLA2G10O15496 165 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 STK16O75716 305 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 PDE9AO76083 593 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 OR7A10O76100 309 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 GRK4P32298 578 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 CNR2P34972 360 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 PTGER3P43115 390 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 SLC9A3P48764 834 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 CDC42EP1Q00587 391 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 LARS2Q15031 903 aaKnown RBP11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 WSCD2Q2TBF2 565 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 UAP1L1Q3KQV9 507 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 FLYWCH1Q4VC44 716 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 CCSAPQ6IQ19 270 aaPredicted RBP11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 PAQR6Q6TCH4 344 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 TRIM46Q7Z4K8 759 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 TMC8Q8IU68 726 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 RDH10Q8IZV5 341 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 DENND6BQ8NEG7 585 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 LKAAEAR1Q8TD35 194 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 SH3KBP1Q96B97 665 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 TADA1Q96BN2 335 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 RAD9AQ99638 391 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 TCF25Q9BQ70 676 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 GPR63Q9BZJ6 419 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 POLHQ9Y253 713 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 LRRTM2O43300 516 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 PRAMEF11O60813 436 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 EIF4HQ15056 248 aaKnown RBP11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 SPHARQ15513 63 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 TTLL9Q3SXZ7 439 aa11.13□□□□□ -0.63
HMGCS1-202ENST00000433297 PLAG1Q6DJT9 500 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms