RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 KATNB1Q9BVA0 655 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 DPAGT1Q9H3H5 408 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 COMMD8Q9NX08 183 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 CNIH4Q9P003 139 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 TBC1D7Q9P0N9 293 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 WNT16Q9UBV4 365 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 ZNHIT2Q9UHR6 403 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 FZD10Q9ULW2 581 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 PADI3Q9ULW8 664 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 HS3ST3A1Q9Y663 406 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 GMEB1Q9Y692 573 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 NCOR2Q9Y618 2525 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 WDR19Q8NEZ3 1342 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 NRCAMQ92823 1304 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 MYH4Q9Y623 1939 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 ACACBO00763 2458 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 RIF1Q5UIP0 2472 aaKnown RBP3.87□□□□□ -1.79
HMGB3-203ENST00000430118 CHD8Q9HCK8 2581 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 IGLV5-39A0A0G2JS06 123 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 A0A1W2PRV1 198 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 NEMP2A6NFY4 417 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 PRR32B1ATL7 298 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 HAS3O00219 553 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 SOCS6O14544 535 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 LUC7L3O95232 432 aaKnown RBP3.87□□□□□ -1.79
HMGB3-203ENST00000430118 PROS1P07225 676 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 SP9P0CG40 484 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 IGHV4-30-4P0DP06 118 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 UROSP10746 265 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 GHRP10912 638 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 IDO1P14902 403 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 EPCAMP16422 314 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 FERP16591 822 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 SLC6A6P31641 620 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 GABRA5P31644 462 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 WNT5AP41221 380 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 PTH2RP49190 550 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 PSMD7P51665 324 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 STARD6P59095 220 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 KIAA1024LP59773 190 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 POLR2LP62875 67 aaKnown RBP3.87□□□□□ -1.79
HMGB3-203ENST00000430118 TRAF2Q12933 501 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 CUL3Q13618 768 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 GIT2Q14161 759 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 FHL2Q14192 279 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 HNF4GQ14541 408 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 PTGR1Q14914 329 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 RPS6KA1Q15418 735 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 TWIST1Q15672 202 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 MDH1BQ5I0G3 518 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 MORN5Q5VZ52 161 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 ALS2CLQ60I27 953 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 MFSD12Q6NUT3 480 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 CCNI2Q6ZMN8 369 aaPredicted RBP3.87□□□□□ -1.79
HMGB3-203ENST00000430118 MEPCEQ7L2J0 689 aaKnown RBP3.87□□□□□ -1.79
HMGB3-203ENST00000430118 RD3Q7Z3Z2 195 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 ARHGAP22Q7Z5H3 698 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 MRPL10Q7Z7H8 261 aaKnown RBP3.87□□□□□ -1.79
HMGB3-203ENST00000430118 GLCCI1Q86VQ1 547 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 LRRC49Q8IUZ0 686 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 CEP112Q8N8E3 955 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 RTL3Q8N8U3 475 aaKnown RBP3.87□□□□□ -1.79
HMGB3-203ENST00000430118 SLC4A11Q8NBS3 891 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 TET1Q8NFU7 2136 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 OR2AK2Q8NG84 335 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 OR2AJ1Q8NGZ0 328 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 HEXDCQ8WVB3 486 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 GIMAP1Q8WWP7 306 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 SMPDL3BQ92485 455 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 ARHGAP45Q92619 1136 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 DHTKD1Q96HY7 919 aaPredicted RBP3.87□□□□□ -1.79
HMGB3-203ENST00000430118 URB1-AS1Q96HZ7 61 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 SPATA33Q96N06 139 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 ALS2CR12Q96Q35 445 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 SLC5A7Q9GZV3 580 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 POMKQ9H5K3 350 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 RIOX1Q9H6W3 641 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 IARS2Q9NSE4 1012 aaKnown RBP3.87□□□□□ -1.79
HMGB3-203ENST00000430118 SLCO1C1Q9NYB5 712 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 SEPT10Q9P0V9 454 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 RHCGQ9UBD6 479 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 IL19Q9UHD0 177 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 APPL1Q9UKG1 709 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 B3GALT5Q9Y2C3 310 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 PADI2Q9Y2J8 665 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 YIPF1Q9Y548 306 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 ATRXP46100 2492 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 ATG2AQ2TAZ0 1938 aa3.87□□□□□ -1.79
HMGB3-203ENST00000430118 FAM208BQ5VWN6 2430 aa3.86□□□□□ -1.79
HMGB3-203ENST00000430118 ZNF292O60281 2723 aa3.86□□□□□ -1.79
HMGB3-203ENST00000430118 IGKV6D-41A0A0C4DH26 115 aa3.86□□□□□ -1.79
HMGB3-203ENST00000430118 ERICH2A1L162 156 aa3.86□□□□□ -1.79
HMGB3-203ENST00000430118 ELOVL7A1L3X0 281 aa3.86□□□□□ -1.79
HMGB3-203ENST00000430118 DENND3A2RUS2 1198 aa3.86□□□□□ -1.79
HMGB3-203ENST00000430118 KCNU1A8MYU2 1149 aa3.86□□□□□ -1.79
HMGB3-203ENST00000430118 FAM86B1E9PN63 330 aa3.86□□□□□ -1.79
HMGB3-203ENST00000430118 PLK4O00444 970 aa3.86□□□□□ -1.79
HMGB3-203ENST00000430118 PRKAB2O43741 272 aa3.86□□□□□ -1.79
HMGB3-203ENST00000430118 GPR137BO60478 399 aa3.86□□□□□ -1.79
HMGB3-203ENST00000430118 SEC22BO75396 215 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms