RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 LRRTM3Q86VH5 581 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 C12orf45Q8N5I9 185 aaPredicted RBP13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 NDRG1Q92597 394 aaKnown RBP13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 USP7Q93009 1102 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 LURAP1Q96LR2 239 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 TRAV19A0A0A6YYK7 116 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 A8MT66 165 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 LINC00587B1AMM8 73 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 GABRDO14764 452 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 HTR3BO95264 441 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 RAF1P04049 648 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 CTGFP29279 349 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 UBXN11Q5T124 520 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 POLE3Q9NRF9 147 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 SPG21Q9NZD8 308 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 GPN3Q9UHW5 284 aaPredicted RBP13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 CMAHPQ9Y471 501 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 ALPLP05186 524 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 HOXD4P09016 255 aaPredicted RBP13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 HGFP14210 728 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 CD6P30203 668 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 AKT1P31749 480 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 NUMBP49757 651 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 RRAS2P62070 204 aaPredicted RBP13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 MAD2L1Q13257 205 aaPredicted RBP13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 LAPTM5Q13571 262 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 KLHL26Q53HC5 615 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 KIAA1324Q6UXG2 1013 aaKnown RBP13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 DENND6AQ8IWF6 608 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 TTC29Q8NA56 475 aaPredicted RBP13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 MRPS31Q92665 395 aaKnown RBP13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 KHSRPQ92945 711 aaKnown RBP eCLIP13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 COQ8BQ96D53 544 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 PCED1BQ96HM7 432 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 SPON2Q9BUD6 331 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 SLC19A3Q9BZV2 496 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 SLC12A8A0AV02 714 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 MYBPHLA2RUH7 354 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 EEFSECP57772 596 aaKnown RBP13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 FADDQ13158 208 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 INO80DQ53TQ3 878 aaPredicted RBP13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 SLC39A5Q6ZMH5 540 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 RTL4Q6ZR62 310 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 CHPFQ8IZ52 775 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 UTP15Q8TED0 518 aaKnown RBP13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 SUSD3Q96L08 255 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 C10orf90Q96M02 699 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 KLHL42Q9P2K6 505 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 FKBP7Q9Y680 259 aa13.96□□□□□ -0.17
SYNGAP1-203ENST00000428982 ABHD14A-ACY1A0A1B0GW23 586 aa13.96□□□□□ -0.18
SYNGAP1-203ENST00000428982 RNGTTO60942 597 aaKnown RBP13.96□□□□□ -0.18
SYNGAP1-203ENST00000428982 PAPSS2O95340 614 aaPredicted RBP13.96□□□□□ -0.18
SYNGAP1-203ENST00000428982 SLC11A2P49281 568 aa13.96□□□□□ -0.18
SYNGAP1-203ENST00000428982 ITGA1P56199 1179 aa13.96□□□□□ -0.18
SYNGAP1-203ENST00000428982 TBPL2Q6SJ96 375 aa13.96□□□□□ -0.18
SYNGAP1-203ENST00000428982 CRTC1Q6UUV9 634 aa13.96□□□□□ -0.18
SYNGAP1-203ENST00000428982 RAB11FIP2Q7L804 512 aa13.96□□□□□ -0.18
SYNGAP1-203ENST00000428982 RBFAQ8N0V3 343 aa13.96□□□□□ -0.18
SYNGAP1-203ENST00000428982 PAPD5Q8NDF8 572 aaKnown RBP13.96□□□□□ -0.18
SYNGAP1-203ENST00000428982 YIPF6Q96EC8 236 aa13.96□□□□□ -0.18
SYNGAP1-203ENST00000428982 PGAP3Q96FM1 320 aaPredicted RBP13.96□□□□□ -0.18
SYNGAP1-203ENST00000428982 TBCDQ9BTW9 1192 aa13.96□□□□□ -0.18
SYNGAP1-203ENST00000428982 ZNF436Q9C0F3 470 aaPredicted RBP13.96□□□□□ -0.18
SYNGAP1-203ENST00000428982 MED11Q9P086 117 aa13.96□□□□□ -0.18
SYNGAP1-203ENST00000428982 MALT1Q9UDY8 824 aa13.96□□□□□ -0.18
SYNGAP1-203ENST00000428982 YJEFN3A6XGL0 299 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 PDCD5O14737 125 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 ZNF682O95780 498 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 RGS4P49798 205 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 CREMQ03060 361 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 STX4Q12846 297 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 TNK1Q13470 666 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 USF2Q15853 346 aaPredicted RBP13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 CLLU1Q5K131 121 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 SHQ1Q6PI26 577 aaKnown RBP13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 SPATA6LQ8N4H0 392 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 ULK4Q96C45 1275 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 PIGUQ9H490 435 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 ZNF334Q9HCZ1 680 aaPredicted RBP13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 SSR3Q9UNL2 185 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 USP3Q9Y6I4 520 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 RBBP6Q7Z6E9 1792 aaKnown RBP13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 AP2A2O94973 939 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 FGF1P05230 155 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 HMGCLP35914 325 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 NDUFV1P49821 464 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 RAB13P51153 203 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 FGL1Q08830 312 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 RAPSNQ13702 412 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 ALOXE3Q9BYJ1 711 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 FOLH1BQ9HBA9 442 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 ZNF639Q9UID6 485 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 FHP07954 510 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 SERPINF2P08697 491 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 OR4Q2P0C623 313 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 PCSK2P16519 638 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 TSPAN8P19075 237 aa13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 PSMA1P25786 263 aaKnown RBP13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 SOX4Q06945 474 aaPredicted RBP13.95□□□□□ -0.18
SYNGAP1-203ENST00000428982 FAM76BQ5HYJ3 339 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms