RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 KARSQ15046 597 aaKnown RBP4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 ADIPOQQ15848 244 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 PSMD5Q16401 504 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 FILIP1LQ4L180 1135 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 CCDC92Q53HC0 331 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 XKR3Q5GH77 459 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 LRIF1Q5T3J3 769 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 CYP4A22Q5TCH4 519 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 CCDC70Q6NSX1 233 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 NOTUMQ6P988 496 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 LCA5Q86VQ0 697 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 RALGPS2Q86X27 583 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 CEP57Q86XR8 500 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 MFSD6LQ8IWD5 586 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 ELMOD1Q8N336 334 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 GCSAMQ8N6F7 178 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 LEMD2Q8NC56 503 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 SYAP1Q96A49 352 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 CCDC34Q96HJ3 373 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 GAD1Q99259 594 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 SEPT5Q99719 369 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 SLX1AQ9BQ83 275 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 EDEM2Q9BV94 578 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 PLA2G2FQ9BZM2 168 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 TRIM6Q9C030 488 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 APOBEC3GQ9HC16 384 aaKnown RBP4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 TMEM9BQ9NQ34 198 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 SLC38A7Q9NVC3 462 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 INTS10Q9NVR2 710 aaKnown RBP4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 PTTG2Q9NZH5 202 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 OGFRQ9NZT2 677 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 SUN2Q9UH99 717 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 ATG2BQ96BY7 2078 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 PI4KAP42356 2102 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 FREM2Q5SZK8 3169 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 ASCC3Q8N3C0 2202 aaKnown RBP4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 ASXL3Q9C0F0 2248 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 AKAP13Q12802 2813 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 IGLV3-22A0A075B6J6 115 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 A6NL46 340 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 C15orf62A8K5M9 175 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 E7EWF7 191 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 CHADO15335 359 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 TRAPPC3O43617 180 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 BMP10O95393 424 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 PLEKHA8P1O95397 391 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 ZNF26P17031 533 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 GNAZP19086 355 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 GNA11P29992 359 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 OR1D2P34982 312 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 TAS2R40P59535 323 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 CREB5Q02930 508 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 SPOCK1Q08629 439 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 DRP2Q13474 957 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 HNRNPDQ14103 355 aaKnown RBP4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 E2F5Q15329 346 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 NAB2Q15742 525 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 TMEM95Q3KNT9 176 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 RAB6CQ53S08 254 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 CYP20A1Q6UW02 462 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 PRSS55Q6UWB4 352 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 HAUS6Q7Z4H7 955 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 CCDC190Q86UF4 302 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 KBTBD6Q86V97 674 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 DIS3L2Q8IYB7 885 aaKnown RBP4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 C1orf52Q8N6N3 182 aaKnown RBP4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 OR8K5Q8NH50 307 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 ZNF461Q8TAF7 563 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 CCDC12Q8WUD4 166 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 TCP11Q8WWU5 503 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 ING5Q8WYH8 240 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 SGCDQ92629 289 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 SMARCD2Q92925 531 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 EXOC4Q96A65 974 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 PERPQ96FX8 193 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 WDFY2Q96P53 400 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 RIT2Q99578 217 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 NAP1L4Q99733 375 aaKnown RBP4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 RAB6CQ9H0N0 254 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 PDZD7Q9H5P4 517 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 CPSF2Q9P2I0 782 aaKnown RBP4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 RSPH14Q9UHP6 348 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 NAV2Q8IVL1 2488 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 URB1O60287 2271 aaKnown RBP4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 THADAQ6YHU6 1953 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 ACACAQ13085 2346 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 BPTFQ12830 3046 aa4.38□□□□□ -1.71
HMGB3P5-201ENST00000428894 MAST4O15021 2626 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 IGSF10Q6WRI0 2623 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 FAM237BA0A1B0GVD1 139 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 CCDC189A1A4V9 331 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 ARHGEF37A1IGU5 675 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 MYBPHLA2RUH7 354 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 TIMM44O43615 452 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 PLPP2O43688 288 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 NDUFS3O75489 264 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 ZNF821O75541 412 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 DAB1O75553 588 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 IGHV4-38-2P0DP08 117 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms