RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 UBE2E3Q969T4 207 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 PGM2Q96G03 612 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 TMEM237Q96Q45 408 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 CPNE5Q9HCH3 593 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 ANKHQ9HCJ1 492 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 COPG2Q9UBF2 871 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 FARSAQ9Y285 508 aaKnown RBP13.86□□□□□ -0.19
SGCE-204ENST00000428696 MRPS2Q9Y399 296 aaKnown RBP13.86□□□□□ -0.19
SGCE-204ENST00000428696 MRPS18BQ9Y676 258 aaKnown RBP13.86□□□□□ -0.19
SGCE-204ENST00000428696 ACACAQ13085 2346 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 A0A0G2JN53 185 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 SGK494L7N484 410 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 B3GALT4O96024 378 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 OTCP00480 354 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 TGFB1P01137 390 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 ZNF888P0CJ79 500 aaPredicted RBP13.85□□□□□ -0.19
SGCE-204ENST00000428696 PRKAR1AP10644 381 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 IL1RNP18510 177 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 FBLP22087 321 aaKnown RBP13.85□□□□□ -0.19
SGCE-204ENST00000428696 F8A1P23610 371 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 NEK2P51955 445 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 RPS18P62269 152 aaKnown RBP13.85□□□□□ -0.19
SGCE-204ENST00000428696 NFKB2Q00653 900 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 TLE3Q04726 772 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 TBCCQ15814 346 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 GARNL3Q5VVW2 1013 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 LIPJQ5W064 366 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 GRHL2Q6ISB3 625 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 METTL2BQ6P1Q9 378 aaKnown RBP13.85□□□□□ -0.19
SGCE-204ENST00000428696 SHISA6Q6ZSJ9 500 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 ANKRD42Q8N9B4 389 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 OR7G3Q8NG95 312 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 OR4F6Q8NGB9 312 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 PPP1R14CQ8TAE6 165 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 ZNF483Q8TF39 744 aaPredicted RBP13.85□□□□□ -0.19
SGCE-204ENST00000428696 SREK1Q8WXA9 508 aaKnown RBP13.85□□□□□ -0.19
SGCE-204ENST00000428696 TM4SF19Q96DZ7 209 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 C10orf90Q96M02 699 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 LRFN5Q96NI6 719 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 GBP5Q96PP8 586 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 MTERF1Q99551 399 aaKnown RBP13.85□□□□□ -0.19
SGCE-204ENST00000428696 DPH2Q9BQC3 489 aaPredicted RBP13.85□□□□□ -0.19
SGCE-204ENST00000428696 MECRQ9BV79 373 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 SHCBP1LQ9BZQ2 653 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 KLHL31Q9H511 634 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 NT5DC2Q9H857 520 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 TRPC4Q9UBN4 977 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 IL17BQ9UHF5 180 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 KCND3Q9UK17 655 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 AHCTF1Q8WYP5 2266 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 SDK2Q58EX2 2172 aa13.85□□□□□ -0.19
SGCE-204ENST00000428696 ADAMTS20P59510 1910 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 URADA6NGE7 173 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 ZNF860A6NHJ4 632 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 SAP18O00422 153 aaKnown RBP13.84□□□□□ -0.19
SGCE-204ENST00000428696 PRPF4O43172 522 aaKnown RBP eCLIP13.84□□□□□ -0.192e-6■■■■□ 25.8
SGCE-204ENST00000428696 CRCPO75575 148 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 RPS17P08708 135 aaKnown RBP13.84□□□□□ -0.19
SGCE-204ENST00000428696 ALDH3A1P30838 453 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 CASP2P42575 452 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 PLA2G16P53816 162 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 MAGOHP61326 146 aaKnown RBP13.84□□□□□ -0.19
SGCE-204ENST00000428696 STXBP1P61764 594 aaKnown RBP13.84□□□□□ -0.19
SGCE-204ENST00000428696 CXADRP78310 365 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 BTN3A2P78410 334 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 ERV3-1Q14264 604 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 ZRSR2Q15696 482 aaKnown RBP13.84□□□□□ -0.19
SGCE-204ENST00000428696 DEFB134Q4QY38 66 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 MFSD4BQ5TF39 518 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 TMEM214Q6NUQ4 689 aaKnown RBP13.84□□□□□ -0.19
SGCE-204ENST00000428696 PRMT9Q6P2P2 845 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 GPRIN3Q6ZVF9 776 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 ABHD13Q7L211 337 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 PRSS41Q7RTY9 318 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 RNF175Q8N4F7 328 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 ENDOVQ8N8Q3 282 aaKnown RBP13.84□□□□□ -0.19
SGCE-204ENST00000428696 NT5CQ8TCD5 201 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 MGARPQ8TDB4 240 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 REPS1Q96D71 796 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 FAR2Q96K12 515 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 F2RL3Q96RI0 385 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 C17orf62Q9BQA9 187 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 EFHD1Q9BUP0 239 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 ACTL8Q9H568 366 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 TMBIM4Q9HC24 238 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 ZBTB26Q9HCK0 441 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 MLXIPLQ9NP71 852 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 OXSMQ9NWU1 459 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 MKS1Q9NXB0 559 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 NAALAD2Q9Y3Q0 740 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 PCDHGA11Q9Y5H2 935 aa13.84□□□□□ -0.19
SGCE-204ENST00000428696 A0A087WV48 116 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 TYROBPO43914 113 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 TRIM13O60858 407 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 OR4F21O95013 312 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 MLYCDO95822 493 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 SERPINA6P08185 405 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 PTPN4P29074 926 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 TMPRSS3P57727 454 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 FOXL2P58012 376 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms