RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 MED28Q9H204 178 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 MINDY3Q9H8M7 445 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 USP21Q9UK80 565 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 ADAM30Q9UKF2 790 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 NCKAP1Q9Y2A7 1128 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 LSM2Q9Y333 95 aaKnown RBP15.54■□□□□ 0.08
C9orf3-206ENST00000428313 E2F3O00716 465 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 PRAMEF1O95521 474 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 HOXB9P17482 250 aaPredicted RBP15.54■□□□□ 0.08
C9orf3-206ENST00000428313 IDH2P48735 452 aaKnown RBP15.54■□□□□ 0.08
C9orf3-206ENST00000428313 ARSDP51689 593 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 PPP3R1P63098 170 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 ABRQ12979 859 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 FCN2Q15485 313 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 MICAQ29983 383 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 PAN2Q504Q3 1202 aaKnown RBP15.54■□□□□ 0.08
C9orf3-206ENST00000428313 CARNMT1Q8N4J0 409 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 METTL6Q8TCB7 284 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 SLC9A6Q92581 669 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 COPS5Q92905 334 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 HGDQ93099 445 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 PHF21AQ96BD5 680 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 KIF12Q96FN5 646 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 TMEM43Q9BTV4 400 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 NFKBIZQ9BYH8 718 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.54■□□□□ 0.08
C9orf3-206ENST00000428313 REG4Q9BYZ8 158 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 PPP1R3EQ9H7J1 279 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 OR12D3Q9UGF7 316 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 DUSP12Q9UNI6 340 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 POFUT2Q9Y2G5 429 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 GJA3Q9Y6H8 435 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 MFSD2BA6NFX1 497 aa15.53■□□□□ 0.08
C9orf3-206ENST00000428313 CDRT1O95170 752 aa15.53■□□□□ 0.08
C9orf3-206ENST00000428313 OR56A5P0C7T3 313 aa15.53■□□□□ 0.08
C9orf3-206ENST00000428313 ANXA3P12429 323 aa15.53■□□□□ 0.08
C9orf3-206ENST00000428313 TGM4P49221 684 aa15.53■□□□□ 0.08
C9orf3-206ENST00000428313 HNRNPA0Q13151 305 aaKnown RBP15.53■□□□□ 0.08
C9orf3-206ENST00000428313 PTGR1Q14914 329 aa15.53■□□□□ 0.08
C9orf3-206ENST00000428313 DUSP6Q16828 381 aa15.53■□□□□ 0.08
C9orf3-206ENST00000428313 HSD17B12Q53GQ0 312 aa15.53■□□□□ 0.08
C9orf3-206ENST00000428313 NOMO2Q5JPE7 1267 aa15.53■□□□□ 0.08
C9orf3-206ENST00000428313 CBLL1Q75N03 491 aa15.53■□□□□ 0.08
C9orf3-206ENST00000428313 SERPINA11Q86U17 422 aa15.53■□□□□ 0.08
C9orf3-206ENST00000428313 TMEM145Q8NBT3 493 aa15.53■□□□□ 0.08
C9orf3-206ENST00000428313 MTMR14Q8NCE2 650 aa15.53■□□□□ 0.08
C9orf3-206ENST00000428313 BCL7CQ8WUZ0 217 aaPredicted RBP15.53■□□□□ 0.08
C9orf3-206ENST00000428313 KCTD13Q8WZ19 329 aa15.53■□□□□ 0.08
C9orf3-206ENST00000428313 HSH2DQ96JZ2 352 aa15.53■□□□□ 0.08
C9orf3-206ENST00000428313 MED18Q9BUE0 208 aa15.53■□□□□ 0.08
C9orf3-206ENST00000428313 SLC6A13Q9NSD5 602 aa15.53■□□□□ 0.08
C9orf3-206ENST00000428313 IMPAD1Q9NX62 359 aa15.53■□□□□ 0.08
C9orf3-206ENST00000428313 ASIC5Q9NY37 505 aa15.53■□□□□ 0.08
C9orf3-206ENST00000428313 BAIAP2Q9UQB8 552 aa15.53■□□□□ 0.08
C9orf3-206ENST00000428313 LIPT1Q9Y234 373 aa15.53■□□□□ 0.08
C9orf3-206ENST00000428313 PRSS44E7EML9 344 aa15.52■□□□□ 0.08
C9orf3-206ENST00000428313 SLC30A4O14863 429 aa15.52■□□□□ 0.08
C9orf3-206ENST00000428313 KPNA5O15131 536 aa15.52■□□□□ 0.08
C9orf3-206ENST00000428313 MPC2O95563 127 aa15.52■□□□□ 0.08
C9orf3-206ENST00000428313 ADRA2AP08913 450 aa15.52■□□□□ 0.08
C9orf3-206ENST00000428313 ITGALP20701 1170 aa15.52■□□□□ 0.08
C9orf3-206ENST00000428313 SDC2P34741 201 aa15.52■□□□□ 0.08
C9orf3-206ENST00000428313 NRG1Q02297 640 aaPredicted RBP15.52■□□□□ 0.08
C9orf3-206ENST00000428313 DOC2BQ14184 412 aa15.52■□□□□ 0.08
C9orf3-206ENST00000428313 ZNF169Q14929 603 aaPredicted RBP15.52■□□□□ 0.08
C9orf3-206ENST00000428313 TUSC1Q2TAM9 212 aa15.52■□□□□ 0.08
C9orf3-206ENST00000428313 MRNIPQ6NTE8 343 aa15.52■□□□□ 0.08
C9orf3-206ENST00000428313 LRFN4Q6PJG9 635 aa15.52■□□□□ 0.08
C9orf3-206ENST00000428313 CATSPERGQ6ZRH7 1159 aa15.52■□□□□ 0.08
C9orf3-206ENST00000428313 RRM2BQ7LG56 351 aa15.52■□□□□ 0.08
C9orf3-206ENST00000428313 ADGRD2Q7Z7M1 963 aa15.52■□□□□ 0.08
C9orf3-206ENST00000428313 LUZP2Q86TE4 346 aa15.52■□□□□ 0.08
C9orf3-206ENST00000428313 OR9Q1Q8NGQ5 310 aa15.52■□□□□ 0.08
C9orf3-206ENST00000428313 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.52■□□□□ 0.08
C9orf3-206ENST00000428313 DPYSL5Q9BPU6 564 aa15.52■□□□□ 0.08
C9orf3-206ENST00000428313 SLC28A3Q9HAS3 691 aa15.52■□□□□ 0.08
C9orf3-206ENST00000428313 TMCC3Q9ULS5 477 aa15.52■□□□□ 0.08
C9orf3-206ENST00000428313 PLXNA1Q9UIW2 1896 aa15.52■□□□□ 0.08
C9orf3-206ENST00000428313 HAS3O00219 553 aa15.52■□□□□ 0.07
C9orf3-206ENST00000428313 MPZL2O60487 215 aa15.52■□□□□ 0.07
C9orf3-206ENST00000428313 MAFKO60675 156 aa15.52■□□□□ 0.07
C9orf3-206ENST00000428313 GLP2RO95838 553 aa15.52■□□□□ 0.07
C9orf3-206ENST00000428313 HMBSP08397 361 aa15.52■□□□□ 0.07
C9orf3-206ENST00000428313 IQCF3P0C7M6 154 aa15.52■□□□□ 0.07
C9orf3-206ENST00000428313 PCSK2P16519 638 aa15.52■□□□□ 0.07
C9orf3-206ENST00000428313 SSTR4P31391 388 aa15.52■□□□□ 0.07
C9orf3-206ENST00000428313 RPL38P63173 70 aaKnown RBP15.52■□□□□ 0.07
C9orf3-206ENST00000428313 IQCCQ4KMZ1 466 aa15.52■□□□□ 0.07
C9orf3-206ENST00000428313 LIMS2Q7Z4I7 341 aa15.52■□□□□ 0.07
C9orf3-206ENST00000428313 ARHGAP12Q8IWW6 846 aa15.52■□□□□ 0.07
C9orf3-206ENST00000428313 LIX1Q8N485 282 aa15.52■□□□□ 0.07
C9orf3-206ENST00000428313 LRRC52Q8N7C0 313 aa15.52■□□□□ 0.07
C9orf3-206ENST00000428313 OR11H4Q8NGC9 324 aa15.52■□□□□ 0.07
C9orf3-206ENST00000428313 MTERF3Q96E29 417 aa15.52■□□□□ 0.07
C9orf3-206ENST00000428313 RBM22Q9NW64 420 aaKnown RBP eCLIP15.52■□□□□ 0.071e-10■■■□□ 17.4
C9orf3-206ENST00000428313 SDHAF2Q9NX18 166 aa15.52■□□□□ 0.07
C9orf3-206ENST00000428313 EIF2B4Q9UI10 523 aaKnown RBP15.52■□□□□ 0.07
C9orf3-206ENST00000428313 OR51F1A6NGY5 319 aa15.51■□□□□ 0.07
C9orf3-206ENST00000428313 ZBTB42B2RXF5 422 aa15.51■□□□□ 0.07
C9orf3-206ENST00000428313 HCRTO43612 131 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms