RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 C12orf71A8MTZ7 269 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 AKR7A2O43488 359 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 KCNJ13O60928 360 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 HLA-DQB2P05538 268 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 ATXN1LP0C7T5 689 aaKnown RBP4.96□□□□□ -1.61
RIF1-203ENST00000428287 CBLP22681 906 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 AVPR1AP37288 418 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 LIMS1P48059 325 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 DSTNP60981 165 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 SMARCB1Q12824 385 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 COL28A1Q2UY09 1125 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 TMEM65Q6PI78 240 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 GALNT10Q86SR1 603 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 RASAL3Q86YV0 1011 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 GPR151Q8TDV0 419 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 ATG4CQ96DT6 458 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 TRMT61AQ96FX7 289 aaKnown RBP4.96□□□□□ -1.61
RIF1-203ENST00000428287 RGS18Q9NS28 235 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 CUEDC1Q9NWM3 386 aaPredicted RBP4.96□□□□□ -1.61
RIF1-203ENST00000428287 DDIT4Q9NX09 232 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 IGLV3-10A0A075B6K4 115 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 A0A1W2PQL4 384 aaPredicted RBP4.96□□□□□ -1.61
RIF1-203ENST00000428287 ADAMDEC1O15204 470 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 HLA-DPA1P20036 260 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 RAB3AP20336 220 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 CBX5P45973 191 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 MAP2K3P46734 347 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 AP1S2P56377 157 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 CD83Q01151 205 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 VEPH1Q14D04 833 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 PCSK7Q16549 785 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 MEDAGQ5VYS4 303 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 TRAF7Q6Q0C0 670 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 SBSNQ6UWP8 590 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 CLEC20AQ6ZU45 233 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 OR6P1Q8NGX9 317 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 TMEM39BQ9GZU3 492 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 THUMPD1Q9NXG2 353 aaKnown RBP4.96□□□□□ -1.61
RIF1-203ENST00000428287 PCDHGA2Q9Y5H1 932 aa4.96□□□□□ -1.61
RIF1-203ENST00000428287 SORL1Q92673 2214 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 DNAJC25-GNG10A0A024R161 153 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 FAM220BPB1ANY3 271 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 MITFO75030 526 aaPredicted RBP4.96□□□□□ -1.62
RIF1-203ENST00000428287 DNTTP04053 509 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 LHCGRP22888 699 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 GEMP55040 296 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 SNRPGP62308 76 aaKnown RBP4.96□□□□□ -1.62
RIF1-203ENST00000428287 UBE3AQ05086 875 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 MLLT11Q13015 90 aaPredicted RBP4.96□□□□□ -1.62
RIF1-203ENST00000428287 NR6A1Q15406 480 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 SMAD1Q15797 465 aaKnown RBP4.96□□□□□ -1.62
RIF1-203ENST00000428287 C9orf57Q5W0N0 161 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 ZNF557Q8N988 423 aaPredicted RBP4.96□□□□□ -1.62
RIF1-203ENST00000428287 OR8K5Q8NH50 307 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 EDEM1Q92611 657 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 MRPL45Q9BRJ2 306 aaKnown RBP4.96□□□□□ -1.62
RIF1-203ENST00000428287 AS3MTQ9HBK9 375 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 WASH6PQ9NQA3 447 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 EXD2Q9NVH0 621 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 MRPS18AQ9NVS2 196 aaKnown RBP4.96□□□□□ -1.62
RIF1-203ENST00000428287 NDUFB11Q9NX14 153 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 MOSPD1Q9UJG1 213 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 FNDC3AQ9Y2H6 1198 aaKnown RBP4.96□□□□□ -1.62
RIF1-203ENST00000428287 BOD1L1Q8NFC6 3051 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 FAM240BA0A1B0GVZ2 78 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 SLC12A8A0AV02 714 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 CCDC182A6NF36 153 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 SOCS7O14512 581 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 PCDH17O14917 1159 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 ARHGEF9O43307 516 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 FADS2O95864 444 aaKnown RBP4.96□□□□□ -1.62
RIF1-203ENST00000428287 ABATP80404 500 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 HSF2Q03933 536 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 GRIK4Q16099 956 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 NHLRC3Q5JS37 347 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 MSANTD2Q6P1R3 559 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 HFE2Q6ZVN8 426 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 NKAPQ8N5F7 415 aaKnown RBP4.96□□□□□ -1.62
RIF1-203ENST00000428287 OR56A4Q8NGH8 313 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 METTL6Q8TCB7 284 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 TM9SF4Q92544 642 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 ATOH1Q92858 354 aaPredicted RBP4.96□□□□□ -1.62
RIF1-203ENST00000428287 FCRL1Q96LA6 429 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 TBATAQ96M53 351 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 TBL1YQ9BQ87 522 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 TMEM168Q9H0V1 697 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 CATSPERBQ9H7T0 1116 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 REEP1Q9H902 201 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 C14orf119Q9NWQ9 140 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 GJD2Q9UKL4 321 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 MAPRE3Q9UPY8 281 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 MYL12BO14950 172 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 SH3BP5O60239 455 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 PTP4A3O75365 173 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 MYL12AP19105 171 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 NETO2Q8NC67 525 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 CAMKVQ8NCB2 501 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 B3GNT7Q8NFL0 401 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 CREB3L1Q96BA8 519 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 SLC47A1Q96FL8 570 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms