RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 FBXO8Q9NRD0 319 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 HCFC1R1Q9NWW0 138 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 SH2B3Q9UQQ2 575 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 LYVE1Q9Y5Y7 322 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 DNAH14Q0VDD8 3507 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 TNFRSF11BO00300 401 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 EIF3FO00303 357 aaPredicted RBP13.94□□□□□ -0.18
HDAC9-208ENST00000417496 TGM5O43548 720 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 SLCO2B1O94956 709 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 GADD45AP24522 165 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 GRK5P34947 590 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 SERPINB10P48595 397 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 SP140Q13342 867 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 SLC22A16Q86VW1 577 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 NPAS3Q8IXF0 933 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 NLGN4XQ8N0W4 816 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 CPXM2Q8N436 756 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 RASGEF1AQ8N9B8 481 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 MCFD2Q8NI22 146 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 UTP15Q8TED0 518 aaKnown RBP13.94□□□□□ -0.18
HDAC9-208ENST00000417496 S100ZQ8WXG8 99 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 PKP4Q99569 1192 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 CORO1BQ9BR76 489 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 LINC00597Q9H2U6 94 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 DSN1Q9H410 356 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 TRIM39Q9HCM9 518 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 ADPRHL2Q9NX46 363 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 TAS2R16Q9NYV7 291 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 PCDHGB3Q9Y5G1 929 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 MYO7AQ13402 2215 aa13.94□□□□□ -0.18
HDAC9-208ENST00000417496 LOC100506127A0A0U1RQW1 187 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 AIREO43918 545 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 LEFTY1O75610 366 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 RFPL2O75678 378 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 MYO1DO94832 1006 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 STSP08842 583 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 HOXB6P17509 224 aaKnown RBP13.93□□□□□ -0.18
HDAC9-208ENST00000417496 IMPA1P29218 277 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 CCR2P41597 374 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 SEPHS1P49903 392 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 CDH12P55289 794 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 PPIGQ13427 754 aaKnown RBP eCLIP13.93□□□□□ -0.18
HDAC9-208ENST00000417496 SYTL3Q4VX76 610 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 ARSIQ5FYB1 569 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 TMEM215Q68D42 235 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 TMPRSS11BQ86T26 416 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 OR9Q2Q8NGE9 314 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 TMEM159Q96B96 161 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 PITX2Q99697 317 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 CPEB1Q9BZB8 566 aaKnown RBP13.93□□□□□ -0.18
HDAC9-208ENST00000417496 C6orf62Q9GZU0 229 aaPredicted RBP13.93□□□□□ -0.18
HDAC9-208ENST00000417496 ABCB10Q9NRK6 738 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 OSGIN1Q9UJX0 560 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 CHD7Q9P2D1 2997 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 ZNF106Q9H2Y7 1883 aaKnown RBP13.93□□□□□ -0.18
HDAC9-208ENST00000417496 TMEM221A6NGB7 291 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 SLC16A5O15375 505 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 TGFB1P01137 390 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 GSTM1P09488 218 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 DBTP11182 482 aaKnown RBP13.93□□□□□ -0.18
HDAC9-208ENST00000417496 HOXD10P28358 340 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 MVDP53602 400 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 SELENOWP63302 87 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 COLEC12Q5KU26 742 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 TMC8Q8IU68 726 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 RAVER1Q8IY67 606 aaKnown RBP13.93□□□□□ -0.18
HDAC9-208ENST00000417496 GGHQ92820 318 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 HPS1Q92902 700 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 POP5Q969H6 163 aaKnown RBP13.93□□□□□ -0.18
HDAC9-208ENST00000417496 EPYCQ99645 322 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 TCF25Q9BQ70 676 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 ITPAQ9BY32 194 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 CCNB1IP1Q9NPC3 277 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 ITM2BQ9Y287 266 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 MAP4K5Q9Y4K4 846 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 MICAL3Q7RTP6 2002 aa13.93□□□□□ -0.18
HDAC9-208ENST00000417496 USP34Q70CQ2 3546 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 H0YIV9 168 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 PRMT3O60678 531 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 PSIP1O75475 530 aaKnown RBP13.92□□□□□ -0.18
HDAC9-208ENST00000417496 C6orf47O95873 294 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 HSMCR30P0CW71 290 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 SLC7A9P82251 487 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 GANABQ14697 944 aaKnown RBP13.92□□□□□ -0.18
HDAC9-208ENST00000417496 TIGD6Q17RP2 521 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 GRHL2Q6ISB3 625 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 MMP21Q8N119 569 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 C11orf65Q8NCR3 313 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 VPS37AQ8NEZ2 397 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 NFKBIDQ8NI38 313 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 PHF10Q8WUB8 498 aaKnown RBP13.92□□□□□ -0.18
HDAC9-208ENST00000417496 CHTF18Q8WVB6 975 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 HTRA1Q92743 480 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 OR51B5Q9H339 312 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 ATAD3AQ9NVI7 634 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 RHCGQ9UBD6 479 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 SLC25A13Q9UJS0 675 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 TRAV19A0A0A6YYK7 116 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 SERTM1A2A2V5 107 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 NPC1O15118 1278 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms