RNA–Protein interactions for RNA: ENST00000415338.1

AC239798.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC239798.2, Length 3,540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC239798.2-201ENST00000415338 NCS1P62166 190 aa13.37□□□□□ -0.27
AC239798.2-201ENST00000415338 SRSF11Q05519 484 aaKnown RBP13.37□□□□□ -0.27
AC239798.2-201ENST00000415338 CTU2Q2VPK5 515 aaKnown RBP13.37□□□□□ -0.27
AC239798.2-201ENST00000415338 TBC1D3GQ6DHY5 549 aa13.37□□□□□ -0.27
AC239798.2-201ENST00000415338 TBC1D3CQ6IPX1 549 aa13.37□□□□□ -0.27
AC239798.2-201ENST00000415338 DCP2Q8IU60 420 aaKnown RBP13.37□□□□□ -0.27
AC239798.2-201ENST00000415338 TBC1D3Q8IZP1 549 aaPredicted RBP13.37□□□□□ -0.27
AC239798.2-201ENST00000415338 MRPL43Q8N983 215 aaKnown RBP13.37□□□□□ -0.27
AC239798.2-201ENST00000415338 MFSD2AQ8NA29 543 aa13.37□□□□□ -0.27
AC239798.2-201ENST00000415338 RPL3LQ92901 407 aaKnown RBP13.37□□□□□ -0.27
AC239798.2-201ENST00000415338 C12orf66Q96MD2 445 aa13.37□□□□□ -0.27
AC239798.2-201ENST00000415338 FUNDC2Q9BWH2 189 aa13.37□□□□□ -0.27
AC239798.2-201ENST00000415338 TPRKBQ9Y3C4 175 aa13.37□□□□□ -0.27
AC239798.2-201ENST00000415338 TRIOBPQ9H2D6 2365 aa13.37□□□□□ -0.27
AC239798.2-201ENST00000415338 OR52A4PA6NMU1 304 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 PRKRAO75569 313 aaKnown RBP13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 CCNDBP1O95273 360 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 TIMP1P01033 207 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 CA3P07451 260 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 HBA1P69905 142 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 SGCGQ13326 291 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 ZNF773Q6PK81 442 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 PRR23BQ6ZRT6 265 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 AMZ2Q86W34 360 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 TMC8Q8IU68 726 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 NACC2Q96BF6 587 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 BBS4Q96RK4 519 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 FEVQ99581 238 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 C17orf62Q9BQA9 187 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 KXD1Q9BQD3 176 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 CHCHD6Q9BRQ6 235 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 NLNQ9BYT8 704 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 SLC6A17Q9H1V8 727 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 ARNTLO00327 626 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 SLC1A7O00341 560 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 MT-ND2P03891 347 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 PRNPP04156 253 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 BUD31P41223 144 aaPredicted RBP13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 CYP2A13Q16696 494 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 TMIGD1Q6UXZ0 262 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 WDR53Q7Z5U6 358 aaPredicted RBP13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 SPRED1Q7Z699 444 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 PTRH1Q86Y79 214 aaKnown RBP13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 PLA2G15Q8NCC3 412 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 OR10G6Q8NH81 332 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 OR4K3Q96R72 315 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 ABCG4Q9H172 646 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 SPNS1Q9H2V7 528 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 PTPRDP23468 1912 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 A0A1W2PP55 124 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 ISM1B1AKI9 464 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 RFXAPO00287 272 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 SLC28A2O43868 658 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 GREM1O60565 184 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 CXCL10P02778 98 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 CYP17A1P05093 508 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 CBSLP0DN79 551 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 CBSP35520 551 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 CSTF3Q12996 717 aaKnown RBP13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 GAB1Q13480 694 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 SCARB2Q14108 478 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 C8orf82Q6P1X6 216 aaPredicted RBP13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 GAB3Q8WWW8 586 aa13.36□□□□□ -0.27
AC239798.2-201ENST00000415338 BOLA2-SMG1P6H3BVE0 249 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 SLC9A3R1O14745 358 aaPredicted RBP13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 GNRH1P01148 92 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 ZNF8P17098 575 aaPredicted RBP13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 C21orf33P30042 268 aaPredicted RBP13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 ATP6V1E1P36543 226 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 PRAMEF14Q5SWL7 426 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 PLEKHS1Q5SXH7 462 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 PRAMEF13Q5VWM6 474 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 RRM2BQ7LG56 351 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 ZNF605Q86T29 641 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 LGI4Q8N135 537 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 CHDHQ8NE62 594 aaPredicted RBP13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 BPIFB1Q8TDL5 484 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 DTNBP1Q96EV8 351 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 CPPED1Q9BRF8 314 aaPredicted RBP13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 MARCH7Q9H992 704 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 SLC52A3Q9NQ40 469 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 CUEDC1Q9NWM3 386 aaPredicted RBP13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 PPM1DO15297 605 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 DDX5P17844 614 aaKnown RBP13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 HLCSP50747 726 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 RPP38P78345 283 aaKnown RBP13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 UBE3AQ05086 875 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 CEACAM20Q6UY09 585 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 TRIM46Q7Z4K8 759 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 SPARTQ8N0X7 666 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 SETD9Q8NE22 299 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 HTRA1Q92743 480 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 TIFAQ96CG3 184 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 ARSGQ96EG1 525 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 TMEM245Q9H330 911 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 PLGRKTQ9HBL7 147 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 PCM1Q15154 2024 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 YY2O15391 372 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 NUAK1O60285 661 aa13.35□□□□□ -0.27
AC239798.2-201ENST00000415338 CYP7B1O75881 506 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms