RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 GDPD3Q7L5L3 318 aa11.22□□□□□ -0.61
SCN4B-202ENST00000415030 SLC30A8Q8IWU4 369 aa11.22□□□□□ -0.61
SCN4B-202ENST00000415030 CELF2-AS1Q8N7Q2 184 aa11.22□□□□□ -0.61
SCN4B-202ENST00000415030 GDPD1Q8N9F7 314 aa11.22□□□□□ -0.61
SCN4B-202ENST00000415030 KCTD7Q96MP8 289 aa11.22□□□□□ -0.61
SCN4B-202ENST00000415030 C2orf49Q9BVC5 232 aaPredicted RBP11.22□□□□□ -0.61
SCN4B-202ENST00000415030 NLNQ9BYT8 704 aa11.22□□□□□ -0.61
SCN4B-202ENST00000415030 PLCXD1Q9NUJ7 323 aa11.22□□□□□ -0.61
SCN4B-202ENST00000415030 TMLHEQ9NVH6 421 aa11.22□□□□□ -0.61
SCN4B-202ENST00000415030 PRELID1Q9Y255 219 aa11.22□□□□□ -0.61
SCN4B-202ENST00000415030 PCDHB11Q9Y5F2 797 aa11.22□□□□□ -0.61
SCN4B-202ENST00000415030 SCN1AP35498 2009 aa11.22□□□□□ -0.61
SCN4B-202ENST00000415030 A0A1B0GTL3 188 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 DRGXA6NNA5 263 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 OR7A17O14581 309 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 WISP3O95389 354 aaPredicted RBP11.21□□□□□ -0.61
SCN4B-202ENST00000415030 PDYNP01213 254 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 CATP04040 527 aaKnown RBP11.21□□□□□ -0.61
SCN4B-202ENST00000415030 POU2F1P14859 743 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 CCND3P30281 292 aaPredicted RBP11.21□□□□□ -0.61
SCN4B-202ENST00000415030 MAB21L1Q13394 359 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 C18orf21Q32NC0 220 aaPredicted RBP11.21□□□□□ -0.61
SCN4B-202ENST00000415030 LRIF1Q5T3J3 769 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 HECTD3Q5T447 861 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 USP30Q70CQ3 517 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 PIANPQ8IYJ0 282 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 MED8Q96G25 268 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 ARHGAP39Q9C0H5 1083 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 CNOT2Q9NZN8 540 aaKnown RBP11.21□□□□□ -0.61
SCN4B-202ENST00000415030 TLR4O00206 839 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 CASKO14936 926 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 CRYZL1O95825 349 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 ITPKAP23677 461 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 ANKRD34AQ69YU3 496 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 TRIM46Q7Z4K8 759 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 TMEM179BQ7Z7N9 219 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 SPNS2Q8IVW8 549 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 ATAD1Q8NBU5 361 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 DNASE1L2Q92874 299 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 SLC39A13Q96H72 371 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 TMEM80Q96HE8 168 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 SPATA17Q96L03 361 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 SESN1Q9Y6P5 492 aa11.21□□□□□ -0.61
SCN4B-202ENST00000415030 COL11A2P13942 1736 aaPredicted RBP11.21□□□□□ -0.61
SCN4B-202ENST00000415030 CXCL14O95715 111 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 ADH1AP07327 375 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 TNFSF8P32971 234 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 ANXA11P50995 505 aaKnown RBP11.21□□□□□ -0.62
SCN4B-202ENST00000415030 IFITM3Q01628 133 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 RIPPLY1Q0D2K3 151 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 NKG7Q16617 165 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 UBQLNLQ8IYU4 475 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 ENTHD1Q8IYW4 607 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 PGBD5Q8N414 524 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 GPR152Q8TDT2 470 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 FAM83DQ9H4H8 585 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 SLC52A3Q9NQ40 469 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 RPS3P23396 243 aaKnown RBP eCLIP11.21□□□□□ -0.62
SCN4B-202ENST00000415030 FSHRP23945 695 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 CDKN1CP49918 316 aaPredicted RBP11.21□□□□□ -0.62
SCN4B-202ENST00000415030 COX10Q12887 443 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 SCARB2Q14108 478 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 LRRC26Q2I0M4 334 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 ZNF284Q2VY69 593 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 CDKL4Q5MAI5 379 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 CTSL3PQ5NE16 218 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 USP45Q70EL2 814 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 NRARPQ7Z6K4 114 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 METTL3Q86U44 580 aaKnown RBP11.21□□□□□ -0.62
SCN4B-202ENST00000415030 OR8H1Q8NGG4 311 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 TMEM159Q96B96 161 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 RHBDF1Q96CC6 855 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 PPCDCQ96CD2 204 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 SYNDIG1Q9H7V2 258 aa11.21□□□□□ -0.62
SCN4B-202ENST00000415030 MRPS23Q9Y3D9 190 aaKnown RBP11.21□□□□□ -0.62
SCN4B-202ENST00000415030 SHROOM3Q8TF72 1996 aa11.2□□□□□ -0.62
SCN4B-202ENST00000415030 SRPRAP08240 638 aaKnown RBP11.2□□□□□ -0.62
SCN4B-202ENST00000415030 CCNYL3P0C7X3 344 aa11.2□□□□□ -0.62
SCN4B-202ENST00000415030 ADORA3P0DMS8 318 aa11.2□□□□□ -0.62
SCN4B-202ENST00000415030 SLC2A2P11168 524 aaPredicted RBP11.2□□□□□ -0.62
SCN4B-202ENST00000415030 HK3P52790 923 aa11.2□□□□□ -0.62
SCN4B-202ENST00000415030 AP1S2P56377 157 aa11.2□□□□□ -0.62
SCN4B-202ENST00000415030 RBBP4Q09028 425 aa11.2□□□□□ -0.62
SCN4B-202ENST00000415030 IL18Q14116 193 aa11.2□□□□□ -0.62
SCN4B-202ENST00000415030 DCST1Q5T197 706 aa11.2□□□□□ -0.62
SCN4B-202ENST00000415030 NPAS3Q8IXF0 933 aa11.2□□□□□ -0.62
SCN4B-202ENST00000415030 OXR1Q8N573 874 aa11.2□□□□□ -0.62
SCN4B-202ENST00000415030 TM6SF2Q9BZW4 377 aa11.2□□□□□ -0.62
SCN4B-202ENST00000415030 RAD18Q9NS91 495 aa11.2□□□□□ -0.62
SCN4B-202ENST00000415030 AHSPQ9NZD4 102 aa11.2□□□□□ -0.62
SCN4B-202ENST00000415030 A0A0D9SEW6 157 aa11.2□□□□□ -0.62
SCN4B-202ENST00000415030 PCDHGA12O60330 932 aa11.2□□□□□ -0.62
SCN4B-202ENST00000415030 CDRT1O95170 752 aa11.2□□□□□ -0.62
SCN4B-202ENST00000415030 PSKH1P11801 424 aa11.2□□□□□ -0.62
SCN4B-202ENST00000415030 PPP2R1BP30154 601 aa11.2□□□□□ -0.62
SCN4B-202ENST00000415030 CSTF2P33240 577 aaKnown RBP eCLIP11.2□□□□□ -0.62
SCN4B-202ENST00000415030 IFNGR2P38484 337 aa11.2□□□□□ -0.62
SCN4B-202ENST00000415030 MAGEA11P43364 429 aa11.2□□□□□ -0.62
SCN4B-202ENST00000415030 PNLIPRP1P54315 467 aa11.2□□□□□ -0.62
SCN4B-202ENST00000415030 TEKQ02763 1124 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms