RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 TRIM55Q9BYV6 548 aa12.67□□□□□ -0.38
CNN3-203ENST00000415017 NUF2Q9BZD4 464 aa12.67□□□□□ -0.38
CNN3-203ENST00000415017 LHX9Q9NQ69 397 aa12.67□□□□□ -0.38
CNN3-203ENST00000415017 APOBEC2Q9Y235 224 aaKnown RBP12.67□□□□□ -0.38
CNN3-203ENST00000415017 PTGDR2Q9Y5Y4 395 aa12.67□□□□□ -0.38
CNN3-203ENST00000415017 SCN3AQ9NY46 2000 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 SPTBN4Q9H254 2564 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 A8MU76 341 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 B4E171 279 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 C4orf51C9J302 202 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 SLC28A1O00337 649 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 TXNDC9O14530 226 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 ZSCAN9O15535 394 aaPredicted RBP12.66□□□□□ -0.38
CNN3-203ENST00000415017 SNX3O60493 162 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 SCELO95171 688 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 FAM107AO95990 144 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 MT-CO3P00414 261 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 LINC00032P0C843 101 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 KITP10721 976 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 FGF5P12034 268 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 ACPPP15309 386 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 SDHBP21912 280 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 HNRNPH1P31943 449 aaKnown RBP12.66□□□□□ -0.38
CNN3-203ENST00000415017 ARL1P40616 181 aaPredicted RBP12.66□□□□□ -0.38
CNN3-203ENST00000415017 TSPAN7P41732 249 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 MLLT3P42568 568 aaPredicted RBP12.66□□□□□ -0.38
CNN3-203ENST00000415017 SEPHS1P49903 392 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 SNRPNP63162 240 aaKnown RBP12.66□□□□□ -0.38
CNN3-203ENST00000415017 MC2RQ01718 297 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 KCNAB1Q14722 419 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 C6orf136Q5SQH8 315 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 DHRS13Q6UX07 377 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 CHSY3Q70JA7 882 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 METTL4Q8N3J2 472 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 CAMKVQ8NCB2 501 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 AGBL5Q8NDL9 886 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 RCBTB1Q8NDN9 531 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 OR8K5Q8NH50 307 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 OR1L3Q8NH93 324 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 C10orf82Q8WW14 230 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 ADAMTS14Q8WXS8 1223 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 MTFMTQ96DP5 389 aaKnown RBP12.66□□□□□ -0.38
CNN3-203ENST00000415017 MS4A6EQ96DS6 147 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 CCT8L2Q96SF2 557 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 SERPINI1Q99574 410 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 CCDC28BQ9BUN5 200 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 PFDN4Q9NQP4 134 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 FBXO8Q9NRD0 319 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 ASIC5Q9NY37 505 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 VPS29Q9UBQ0 182 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 SLC22A7Q9Y694 548 aa12.66□□□□□ -0.38
CNN3-203ENST00000415017 A0A1W2PNU3 283 aaPredicted RBP12.65□□□□□ -0.38
CNN3-203ENST00000415017 VPS4BO75351 444 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 SKAP2O75563 359 aaPredicted RBP12.65□□□□□ -0.38
CNN3-203ENST00000415017 CRCPO75575 148 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 KLHL18O94889 574 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 TROVE2P10155 538 aaKnown RBP eCLIP12.65□□□□□ -0.38
CNN3-203ENST00000415017 PCNAP12004 261 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 BSGP35613 385 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 TSFMP43897 325 aaKnown RBP12.65□□□□□ -0.38
CNN3-203ENST00000415017 MRPL19P49406 292 aaKnown RBP12.65□□□□□ -0.38
CNN3-203ENST00000415017 AQP5P55064 265 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 SIM1P81133 766 aaPredicted RBP12.65□□□□□ -0.38
CNN3-203ENST00000415017 ACY1Q03154 408 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 CYP4F3Q08477 520 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 GPR19Q15760 415 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 PDCD2Q16342 344 aaPredicted RBP12.65□□□□□ -0.38
CNN3-203ENST00000415017 RSPO4Q2I0M5 234 aaPredicted RBP12.65□□□□□ -0.38
CNN3-203ENST00000415017 HKDC1Q2TB90 917 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 DEFB110Q30KQ9 67 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 SNAP47Q5SQN1 464 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 WASHC2DQ5SRD0 308 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 VWA5B1Q5TIE3 1220 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 GARNL3Q5VVW2 1013 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 ABHD17CQ6PCB6 329 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 SCIMPQ6UWF3 145 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 TMPRSS12Q86WS5 348 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 KCT2Q8NC54 265 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 OR2L5Q8NG80 312 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 QRFPRQ96P65 431 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 DEPDC7Q96QD5 511 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 OR52B2Q96RD2 323 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 HBEGFQ99075 208 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 EBF4Q9BQW3 602 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 KLHL31Q9H511 634 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 AKTIPQ9H8T0 292 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 NPHS2Q9NP85 383 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 PRDM7Q9NQW5 492 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 FGF21Q9NSA1 209 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 OCIAD1Q9NX40 245 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 SOHLH2Q9NX45 425 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 CDV3Q9UKY7 258 aaKnown RBP12.65□□□□□ -0.38
CNN3-203ENST00000415017 RUVBL1Q9Y265 456 aaKnown RBP12.65□□□□□ -0.38
CNN3-203ENST00000415017 FIS1Q9Y3D6 152 aa12.65□□□□□ -0.38
CNN3-203ENST00000415017 PLPP1O14494 284 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 NDUFS4O43181 175 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 MAP3K7O43318 606 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 RGS14O43566 566 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 CSO75390 466 aaKnown RBP12.64□□□□□ -0.39
CNN3-203ENST00000415017 MED26O95402 600 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms