RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 EME2A4GXA9 379 aaPredicted RBP2.44□□□□□ -2.02
MCF2-204ENST00000414978 TMEM200CA6NKL6 621 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 H3BMM5 538 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 J3KR12 359 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 L7N2F9 121 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 ECI2O75521 394 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 CIAO1O76071 339 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 TOP3BO95985 862 aaKnown RBP2.44□□□□□ -2.02
MCF2-204ENST00000414978 LIPFP07098 398 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 DANCRP0C864 163 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 C8orf89P0DMQ9 161 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 MYOGP15173 224 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 CYP2F1P24903 491 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 MPGP29372 298 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 GDI1P31150 447 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 SULT1E1P49888 294 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 CDH12P55289 794 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 MESP2Q0VG99 397 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 ABRQ12979 859 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 SYT16Q17RD7 645 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 BOLA3Q53S33 107 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 TCEAL5Q5H9L2 206 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 METTL11BQ5VVY1 283 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 FAM46CQ5VWP2 391 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 ENPP7Q6UWV6 458 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 Q6ZTK2 550 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 RUFY3Q7L099 469 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 LUZP1Q86V48 1076 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 TTC9BQ8N6N2 239 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 IL17DQ8TAD2 202 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 FCGR1BQ92637 280 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 DNASE1L2Q92874 299 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 MS4A10Q96PG2 267 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 TCHPQ9BT92 498 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 GCOM2Q9BZD3 368 aaPredicted RBP2.44□□□□□ -2.02
MCF2-204ENST00000414978 MRPL37Q9BZE1 423 aaKnown RBP2.44□□□□□ -2.02
MCF2-204ENST00000414978 SRD5A3Q9H8P0 318 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 ATAD3AQ9NVI7 634 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 DNAJC17Q9NVM6 304 aaKnown RBP2.44□□□□□ -2.02
MCF2-204ENST00000414978 DPP3Q9NY33 737 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 DONSONQ9NYP3 566 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 ERAP1Q9NZ08 941 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 INSL6Q9Y581 213 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.44□□□□□ -2.02
MCF2-204ENST00000414978 PRRC2BQ5JSZ5 2229 aaKnown RBP2.44□□□□□ -2.02
MCF2-204ENST00000414978 TRANK1O15050 2925 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 A0A0G2JPF8 293 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 A0A0U1RQF3 1178 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 HNRNPCL3B7ZW38 293 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 B4GAT1O43505 415 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 NEURL1O76050 574 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 SNAI1O95863 264 aaPredicted RBP2.44□□□□□ -2.02
MCF2-204ENST00000414978 HNRNPCL4P0DMR1 293 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 DLATP10515 647 aaKnown RBP2.44□□□□□ -2.02
MCF2-204ENST00000414978 GOT1P17174 413 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 SP100P23497 879 aaPredicted RBP2.44□□□□□ -2.02
MCF2-204ENST00000414978 HOXA6P31267 233 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 GRIA3P42263 894 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 CENPAP49450 140 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 LPIN1Q14693 890 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 DPYSL2Q16555 572 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 BATF2Q8N1L9 274 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 SLC25A41Q8N5S1 370 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 SCCPDHQ8NBX0 429 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 ARNTL2Q8WYA1 636 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 APBB2Q92870 758 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 CASD1Q96PB1 797 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 GFM1Q96RP9 751 aaKnown RBP2.44□□□□□ -2.02
MCF2-204ENST00000414978 SLC38A3Q99624 504 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 INPP5KQ9BT40 448 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 KCNN2Q9H2S1 579 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 DPAGT1Q9H3H5 408 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 MRPL17Q9NRX2 175 aaKnown RBP2.44□□□□□ -2.02
MCF2-204ENST00000414978 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.44□□□□□ -2.02
MCF2-204ENST00000414978 ADAM21Q9UKJ8 722 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 EXO1Q9UQ84 846 aaKnown RBP2.44□□□□□ -2.02
MCF2-204ENST00000414978 NCKAP1Q9Y2A7 1128 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 STON1Q9Y6Q2 735 aa2.44□□□□□ -2.02
MCF2-204ENST00000414978 MUC22E2RYF6 1773 aaPredicted RBP2.44□□□□□ -2.02
MCF2-204ENST00000414978 ASTN1O14525 1302 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 CFAP73A6NFT4 308 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 MARCH11A6NNE9 402 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 MOSPD3O75425 235 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 CBR3O75828 277 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 POLR2MP0CAP2 368 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 TOP1P11387 765 aaKnown RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 CD22P20273 847 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 CSTF2P33240 577 aaKnown RBP eCLIP2.43□□□□□ -2.02
MCF2-204ENST00000414978 AVPR1AP37288 418 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 ARL1P40616 181 aaPredicted RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 NKX2-1P43699 371 aaPredicted RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 MMP13P45452 471 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 HNRNPFP52597 415 aaKnown RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 CFHR1Q03591 330 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 ZFP36L1Q07352 338 aaKnown RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 FOXM1Q08050 763 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 CTF1Q16619 201 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 CCDC57Q2TAC2 916 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 METAP1DQ6UB28 335 aaPredicted RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 PRSS55Q6UWB4 352 aaPredicted RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms