RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 RPTNQ6XPR3 784 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 SHISA6Q6ZSJ9 500 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 UBE2R2Q712K3 238 aaPredicted RBP5.89□□□□□ -1.47
RPA3-204ENST00000406109 CDH24Q86UP0 819 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 CEP97Q8IW35 865 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 FAM20CQ8IXL6 584 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 MMP21Q8N119 569 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 MYO1HQ8N1T3 1032 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 LINC01555Q8NAE3 123 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 OR2L8Q8NGY9 312 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 MCOLN3Q8TDD5 553 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 DENND1AQ8TEH3 1009 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 HAS2Q92819 552 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 FKBP10Q96AY3 582 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 SLC22A18Q96BI1 424 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 ALKBH8Q96BT7 664 aaKnown RBP5.89□□□□□ -1.47
RPA3-204ENST00000406109 C14orf79Q96F83 325 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 VPS39Q96JC1 886 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 HIST1H2AHQ96KK5 128 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 CYTH2Q99418 400 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 CPNE1Q99829 537 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 HIST1H2AJQ99878 128 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 TREX2Q9BQ50 279 aaPredicted RBP5.89□□□□□ -1.47
RPA3-204ENST00000406109 H2AFJQ9BTM1 129 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 TRIM54Q9BYV2 358 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 FAM129AQ9BZQ8 928 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 RHOJQ9H4E5 214 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 CAB39LQ9H9S4 337 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 ENAMQ9NRM1 1142 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 PLA2G3Q9NZ20 509 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 ABI3Q9P2A4 366 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 CTSFQ9UBX1 484 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 ADAMTS6Q9UKP5 1117 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 KLHL20Q9Y2M5 609 aa5.89□□□□□ -1.47
RPA3-204ENST00000406109 A0A0J9YY10 115 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 A0A1B0GTL3 188 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 PABPN1LA6NDY0 278 aaKnown RBP5.88□□□□□ -1.47
RPA3-204ENST00000406109 POC1B-GALNT4F8VUJ3 575 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 EIF3FO00303 357 aaPredicted RBP5.88□□□□□ -1.47
RPA3-204ENST00000406109 SLC16A5O15375 505 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 SLU7O95391 586 aaKnown RBP5.88□□□□□ -1.47
RPA3-204ENST00000406109 ALBP02768 609 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 C8GP07360 202 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 FAM153BP0C7A2 387 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 PRR35P0CG20 571 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 ALAS2P22557 587 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 ECHS1P30084 290 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 PKLRP30613 574 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 RPA3P35244 121 aaPredicted RBP5.88□□□□□ -1.47
RPA3-204ENST00000406109 HSD17B2P37059 387 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 MSH2P43246 934 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 PNLIPRP1P54315 467 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 POU4F1Q01851 419 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 ILF2Q12905 390 aaKnown RBP5.88□□□□□ -1.47
RPA3-204ENST00000406109 EFTUD2Q15029 972 aaKnown RBP eCLIP5.88□□□□□ -1.473e-6■■■■■ 41.9
RPA3-204ENST00000406109 INAQ16352 499 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 C3AR1Q16581 482 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 SLC5A12Q1EHB4 618 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 TUBB8Q3ZCM7 444 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 FAM153CQ494X1 144 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.88□□□□□ -1.47
RPA3-204ENST00000406109 UBAP2Q5T6F2 1119 aaKnown RBP5.88□□□□□ -1.47
RPA3-204ENST00000406109 LRRC8EQ6NSJ5 796 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 SUSD1Q6UWL2 747 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 TTLL10Q6ZVT0 673 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 RAPH1Q70E73 1250 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 RELL1Q8IUW5 271 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 SPATA6LQ8N4H0 392 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 NKAPQ8N5F7 415 aaKnown RBP5.88□□□□□ -1.47
RPA3-204ENST00000406109 PPFIBP2Q8ND30 876 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 BRIX1Q8TDN6 353 aaKnown RBP5.88□□□□□ -1.47
RPA3-204ENST00000406109 ANKRD49Q8WVL7 239 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 DLG3Q92796 817 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 N4BP2L2Q92802 583 aaPredicted RBP5.88□□□□□ -1.47
RPA3-204ENST00000406109 C8orf44Q96CB5 159 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 MTFMTQ96DP5 389 aaKnown RBP5.88□□□□□ -1.47
RPA3-204ENST00000406109 TSPAN17Q96FV3 270 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 PDLIM5Q96HC4 596 aaKnown RBP5.88□□□□□ -1.47
RPA3-204ENST00000406109 MAGEB10Q96LZ2 347 aaPredicted RBP5.88□□□□□ -1.47
RPA3-204ENST00000406109 CCDC138Q96M89 665 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 ZNF285Q96NJ3 590 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 RBBP8Q99708 897 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 MIPEPQ99797 713 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 SPOCK3Q9BQ16 436 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 NDC1Q9BTX1 674 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 MENTQ9BUN1 341 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 ACAT2Q9BWD1 397 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 RAB11FIP5Q9BXF6 653 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 ENKD1Q9H0I2 346 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 CDC42EP4Q9H3Q1 356 aaKnown RBP5.88□□□□□ -1.47
RPA3-204ENST00000406109 SOX17Q9H6I2 414 aaPredicted RBP5.88□□□□□ -1.47
RPA3-204ENST00000406109 EPS8L2Q9H6S3 715 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 PARVBQ9HBI1 364 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 MCCC2Q9HCC0 563 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 GPAMQ9HCL2 828 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 TXLNGQ9NUQ3 528 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 EURLQ9NYK6 297 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 SPATA7Q9P0W8 599 aa5.88□□□□□ -1.47
RPA3-204ENST00000406109 SUCOQ9UBS9 1254 aaKnown RBP5.88□□□□□ -1.47
RPA3-204ENST00000406109 TINAGQ9UJW2 476 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms