RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 PNPT1Q8TCS8 783 aaKnown RBP14.35□□□□□ -0.11
CBX3-202ENST00000396386 PPCDCQ96CD2 204 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 SLC6A17Q9H1V8 727 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 RHBGQ9H310 441 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 PRO3102Q9H379 93 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 PREBQ9HCU5 417 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 CLDND1Q9NY35 253 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 RPS6KA6Q9UK32 745 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 UTS2RQ9UKP6 389 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 SLC17A4Q9Y2C5 497 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 GMEB1Q9Y692 573 aa14.35□□□□□ -0.11
CBX3-202ENST00000396386 ADAM23O75077 832 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 SEMA3DO95025 777 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 KCNK5O95279 499 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 EGFP01133 1207 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 C1QCP02747 245 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 ALBP02768 609 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 GBAP04062 536 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 TFAP2AP05549 437 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 GNAO1P09471 354 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 COL9A1P20849 921 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 VAC14Q08AM6 782 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 GAB1Q13480 694 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 CYBRD1Q53TN4 286 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 FAM71E1Q6IPT2 247 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 STK32CQ86UX6 486 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 SATL1Q86VE3 508 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 PTOV1Q86YD1 416 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 CLEC4FQ8N1N0 589 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 TSPAN14Q8NG11 270 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 ZFP90Q8TF47 636 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 MTERF3Q96E29 417 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 FBXL20Q96IG2 436 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 FERD3LQ96RJ6 166 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 TSC22D3Q99576 134 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 GDF15Q99988 308 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 RAB11FIP5Q9BXF6 653 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 GRIP2Q9C0E4 1043 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 PITHD1Q9GZP4 211 aaPredicted RBP14.34□□□□□ -0.11
CBX3-202ENST00000396386 CAAP1Q9H8G2 361 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 CUEDC1Q9NWM3 386 aaPredicted RBP14.34□□□□□ -0.11
CBX3-202ENST00000396386 AHSPQ9NZD4 102 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 KCNK6Q9Y257 313 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 WDR37Q9Y2I8 494 aa14.34□□□□□ -0.11
CBX3-202ENST00000396386 A0A1W2PPV9 198 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 EME2A4GXA9 379 aaPredicted RBP14.33□□□□□ -0.11
CBX3-202ENST00000396386 ANKDD1BA6NHY2 528 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 ANHXE9PGG2 379 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 G3V2T6 193 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 H0YAE9 185 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 CACNB4O00305 520 aaPredicted RBP14.33□□□□□ -0.11
CBX3-202ENST00000396386 KCNJ13O60928 360 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 SNAP29O95721 258 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 ZNF682O95780 498 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 CEACAM5P06731 702 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 KLK1P06870 262 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 THRBP10828 461 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 PSMB5P28074 263 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 TAS2R50P59544 299 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 C2orf80Q0P641 193 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 KCTD21Q4G0X4 260 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 SLC9B2Q86UD5 537 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 SYNPOQ8N3V7 929 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 ABHD11Q8NFV4 315 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 RDH12Q96NR8 316 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 INSM2Q96T92 566 aaPredicted RBP14.33□□□□□ -0.11
CBX3-202ENST00000396386 MS4A8Q9BY19 250 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 CHST8Q9H2A9 424 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 CLK4Q9HAZ1 481 aaKnown RBP14.33□□□□□ -0.11
CBX3-202ENST00000396386 IMP3Q9NV31 184 aaKnown RBP14.33□□□□□ -0.11
CBX3-202ENST00000396386 FZD4Q9ULV1 537 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 SCML1Q9UN30 329 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 ERVK-11Q9UQG0 969 aa14.33□□□□□ -0.11
CBX3-202ENST00000396386 A0A1B0GTW7 788 aa14.33□□□□□ -0.12
CBX3-202ENST00000396386 A0A1W2PQF6 199 aa14.33□□□□□ -0.12
CBX3-202ENST00000396386 FUCA1P04066 466 aa14.33□□□□□ -0.12
CBX3-202ENST00000396386 ALPLP05186 524 aa14.33□□□□□ -0.12
CBX3-202ENST00000396386 MAT2AP31153 395 aaKnown RBP14.33□□□□□ -0.12
CBX3-202ENST00000396386 MAGEA2P43356 314 aa14.33□□□□□ -0.12
CBX3-202ENST00000396386 NR1H2P55055 460 aa14.33□□□□□ -0.12
CBX3-202ENST00000396386 ADARB1P78563 741 aaKnown RBP14.33□□□□□ -0.12
CBX3-202ENST00000396386 CTBSQ01459 385 aa14.33□□□□□ -0.12
CBX3-202ENST00000396386 VEZF1Q14119 521 aa14.33□□□□□ -0.12
CBX3-202ENST00000396386 MLF2Q15773 248 aaPredicted RBP14.33□□□□□ -0.12
CBX3-202ENST00000396386 KHDRBS2Q5VWX1 349 aaKnown RBP14.33□□□□□ -0.12
CBX3-202ENST00000396386 TTC33Q6PID6 262 aaPredicted RBP14.33□□□□□ -0.12
CBX3-202ENST00000396386 GOT1L1Q8NHS2 421 aaPredicted RBP14.33□□□□□ -0.12
CBX3-202ENST00000396386 NECTIN4Q96NY8 510 aa14.33□□□□□ -0.12
CBX3-202ENST00000396386 NRTNQ99748 197 aa14.33□□□□□ -0.12
CBX3-202ENST00000396386 DPH2Q9BQC3 489 aaPredicted RBP14.33□□□□□ -0.12
CBX3-202ENST00000396386 APOOQ9BUR5 198 aa14.33□□□□□ -0.12
CBX3-202ENST00000396386 BTBD1Q9H0C5 482 aa14.33□□□□□ -0.12
CBX3-202ENST00000396386 NT5DC2Q9H857 520 aa14.33□□□□□ -0.12
CBX3-202ENST00000396386 FZD3Q9NPG1 666 aa14.33□□□□□ -0.12
CBX3-202ENST00000396386 USE1Q9NZ43 259 aa14.33□□□□□ -0.12
CBX3-202ENST00000396386 SPASTQ9UBP0 616 aa14.33□□□□□ -0.12
CBX3-202ENST00000396386 MOSPD1Q9UJG1 213 aa14.33□□□□□ -0.12
CBX3-202ENST00000396386 SUFUQ9UMX1 484 aa14.33□□□□□ -0.12
CBX3-202ENST00000396386 ATG2BQ96BY7 2078 aa14.33□□□□□ -0.12
CBX3-202ENST00000396386 A0A0C4DFX4 3053 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms