RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 CPXM2Q8N436 756 aa9.68□□□□□ -0.86
UBE2D3-208ENST00000394803 OR52N2Q8NGI0 321 aa9.68□□□□□ -0.86
UBE2D3-208ENST00000394803 OR4A15Q8NGL6 344 aa9.68□□□□□ -0.86
UBE2D3-208ENST00000394803 GOT1L1Q8NHS2 421 aaPredicted RBP9.68□□□□□ -0.86
UBE2D3-208ENST00000394803 CDC26Q8NHZ8 85 aa9.68□□□□□ -0.86
UBE2D3-208ENST00000394803 ZNF461Q8TAF7 563 aa9.68□□□□□ -0.86
UBE2D3-208ENST00000394803 SH3KBP1Q96B97 665 aa9.68□□□□□ -0.86
UBE2D3-208ENST00000394803 MCCC1Q96RQ3 725 aaPredicted RBP9.68□□□□□ -0.86
UBE2D3-208ENST00000394803 TSEN34Q9BSV6 310 aaKnown RBP9.68□□□□□ -0.86
UBE2D3-208ENST00000394803 CDADC1Q9BWV3 514 aa9.68□□□□□ -0.86
UBE2D3-208ENST00000394803 CPEB1Q9BZB8 566 aaKnown RBP9.68□□□□□ -0.86
UBE2D3-208ENST00000394803 OR2B2Q9GZK3 357 aa9.68□□□□□ -0.86
UBE2D3-208ENST00000394803 TMEM38AQ9H6F2 299 aa9.68□□□□□ -0.86
UBE2D3-208ENST00000394803 PRM3Q9NNZ6 103 aa9.68□□□□□ -0.86
UBE2D3-208ENST00000394803 SACM1LQ9NTJ5 587 aa9.68□□□□□ -0.86
UBE2D3-208ENST00000394803 ATP6V1HQ9UI12 483 aa9.68□□□□□ -0.86
UBE2D3-208ENST00000394803 ANGPT4Q9Y264 503 aa9.68□□□□□ -0.86
UBE2D3-208ENST00000394803 TRAPPC4Q9Y296 219 aa9.68□□□□□ -0.86
UBE2D3-208ENST00000394803 HCN4Q9Y3Q4 1203 aa9.68□□□□□ -0.86
UBE2D3-208ENST00000394803 PCDHGA2Q9Y5H1 932 aa9.68□□□□□ -0.86
UBE2D3-208ENST00000394803 CASP8AP2Q9UKL3 1982 aa9.68□□□□□ -0.86
UBE2D3-208ENST00000394803 LOC100506127A0A0U1RQW1 187 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 NPIPB15A6NHN6 443 aaPredicted RBP9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 GFRA2O00451 464 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 AXIN1O15169 862 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 KRT75O95678 551 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 LAMP1P11279 417 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 CYP2A6P11509 494 aaPredicted RBP9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 ITPKAP23677 461 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 GJA8P48165 433 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 IDH2P48735 452 aaKnown RBP9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 PRIM2P49643 509 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 FLT3LGP49771 235 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 ST3GAL4Q11206 333 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 SLC13A2Q13183 592 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 ATP13A5Q4VNC0 1218 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 CLECL1Q8IZS7 167 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 OR9Q1Q8NGQ5 310 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 ECHDC3Q96DC8 303 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 MTERF3Q96E29 417 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 CCDC97Q96F63 343 aaPredicted RBP9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 ALOXE3Q9BYJ1 711 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 RNF38Q9H0F5 515 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 SUV39H2Q9H5I1 410 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 BRD9Q9H8M2 597 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 SGK2Q9HBY8 427 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 CCDC177Q9NQR7 707 aaPredicted RBP9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 POLE4Q9NR33 117 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 SIRT5Q9NXA8 310 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 NDUFAF4Q9P032 175 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 MAFFQ9ULX9 164 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 WBP11Q9Y2W2 641 aaKnown RBP9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 YIPF1Q9Y548 306 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 PIKFYVEQ9Y2I7 2098 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 FAM172BPA6NC97 362 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 TBKBP1A7MCY6 615 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 RGS13O14921 159 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 ZW10O43264 779 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 SGTAO43765 313 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 TLL1O43897 1013 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 CCNB2O95067 398 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 PARNO95453 639 aaKnown RBP9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 VIPP01282 170 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 EPHA2P29317 976 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 TIA1P31483 386 aaKnown RBP eCLIP9.67□□□□□ -0.867e-8■■■□□ 14.9
UBE2D3-208ENST00000394803 CASP3P42574 277 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 SEPHS1P49903 392 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 EPHB3P54753 998 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 PFN3P60673 137 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 DMC1Q14565 340 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 SYTL3Q4VX76 610 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 AGAP6Q5VW22 663 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 MEDAGQ5VYS4 303 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 Q6ZNB5 142 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 FAM124AQ86V42 546 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 HEATR4Q86WZ0 1026 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 METTL4Q8N3J2 472 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 SLC5A8Q8N695 610 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 C1orf52Q8N6N3 182 aaKnown RBP9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 OR4C15Q8NGM1 316 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 OR6K2Q8NGY2 324 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 FIBINQ8TAL6 211 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 UTP15Q8TED0 518 aaKnown RBP9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 ELMO1Q92556 727 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 FOPNLQ96NB1 174 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 AGAP4Q96P64 663 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 TRNT1Q96Q11 434 aaKnown RBP9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 PIP5K1AQ99755 562 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 DPH2Q9BQC3 489 aaPredicted RBP9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 SLC30A2Q9BRI3 323 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 RHNO1Q9BSD3 238 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 HOXD1Q9GZZ0 328 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 EHD3Q9NZN3 535 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 AASSQ9UDR5 926 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 ZNF221Q9UK13 617 aa9.67□□□□□ -0.86
UBE2D3-208ENST00000394803 GNG14A0A1W2PPG7 69 aa9.66□□□□□ -0.86
UBE2D3-208ENST00000394803 C2orf78A6NCI8 922 aa9.66□□□□□ -0.86
UBE2D3-208ENST00000394803 GABRR3A8MPY1 467 aa9.66□□□□□ -0.86
UBE2D3-208ENST00000394803 FAM47E-STBD1D6RA91 191 aa9.66□□□□□ -0.86
UBE2D3-208ENST00000394803 K7ERQ8 282 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms