RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 TRPV3Q8NET8 790 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 TTLQ8NG68 377 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 NT5CQ8TCD5 201 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 STT3BQ8TCJ2 826 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 UBTD2Q8WUN7 234 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 KCTD4Q8WVF5 259 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.12□□□□□ -1.11
APLF-202ENST00000394342 EXT2Q93063 718 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 MIEF2Q96C03 454 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 MMABQ96EY8 250 aaPredicted RBP8.12□□□□□ -1.11
APLF-202ENST00000394342 SEC16BQ96JE7 1060 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 VPS50Q96JG6 964 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 FER1L6-AS2Q96M78 137 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 TGIF2Q9GZN2 237 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 ING2Q9H160 280 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 SPNS1Q9H2V7 528 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 EHD1Q9H4M9 534 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 SOX17Q9H6I2 414 aaPredicted RBP8.12□□□□□ -1.11
APLF-202ENST00000394342 NT5DC2Q9H857 520 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 ANKHQ9HCJ1 492 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 ACSS2Q9NR19 701 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 C14orf105Q9NVL8 296 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 COPG2Q9UBF2 871 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 FETUBQ9UGM5 382 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 ZFP69BQ9UJL9 534 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 MAP4K5Q9Y4K4 846 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 PCDHGA9Q9Y5G4 932 aaKnown RBP8.12□□□□□ -1.11
APLF-202ENST00000394342 SLC22A7Q9Y694 548 aa8.12□□□□□ -1.11
APLF-202ENST00000394342 DIDO1Q9BTC0 2240 aaKnown RBP8.11□□□□□ -1.11
APLF-202ENST00000394342 FREM3P0C091 2139 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 URADA6NGE7 173 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 TRIM49D1C9J1S8 452 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 AGPSO00116 658 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 UBXN8O00124 270 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 MAP2K7O14733 419 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 PCDH17O14917 1159 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 NDUFS4O43181 175 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 KLHL41O60662 606 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 CEACAM4O75871 244 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 STATHP02808 62 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 SERPINA6P08185 405 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 CYC1P08574 325 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 SNRPAP09012 282 aaKnown RBP8.11□□□□□ -1.11
APLF-202ENST00000394342 FAM153BP0C7A2 387 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 COL6A2P12110 1019 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 VARSP26640 1264 aaKnown RBP8.11□□□□□ -1.11
APLF-202ENST00000394342 GDF5P43026 501 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 KLC1Q07866 573 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 CHAF1BQ13112 559 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 LAPTM5Q13571 262 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 HERC3Q15034 1050 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 TBCCQ15814 346 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 TSNAXIP1Q2TAA8 658 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 FAM153CQ494X1 144 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 TCTN3Q6NUS6 607 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 ABHD13Q7L211 337 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 KRT78Q8N1N4 520 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 AMER3Q8N944 861 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 SNX31Q8N9S9 440 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 KCT2Q8NC54 265 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 ZNF740Q8NDX6 193 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 OR9A4Q8NGU2 314 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 UHMK1Q8TAS1 419 aaKnown RBP8.11□□□□□ -1.11
APLF-202ENST00000394342 ZCCHC10Q8TBK6 192 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 MTBPQ96DY7 904 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 WDR34Q96EX3 536 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 ABHD17AQ96GS6 310 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 GPR78Q96P69 363 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 MACROD1Q9BQ69 325 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 CRB3Q9BUF7 120 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 YIPF2Q9BWQ6 316 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 TRIM55Q9BYV6 548 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 CD244Q9BZW8 370 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 VPS11Q9H270 941 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 P4HTMQ9NXG6 502 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 TRPC4Q9UBN4 977 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 TMCO1Q9UM00 188 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 G3BP2Q9UN86 482 aaKnown RBP8.11□□□□□ -1.11
APLF-202ENST00000394342 MRPS2Q9Y399 296 aaKnown RBP8.11□□□□□ -1.11
APLF-202ENST00000394342 PCDHGB7Q9Y5F8 929 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 EXPH5Q8NEV8 1989 aa8.11□□□□□ -1.11
APLF-202ENST00000394342 UBR5O95071 2799 aaPredicted RBP8.1□□□□□ -1.11
APLF-202ENST00000394342 DNAJC13O75165 2243 aa8.1□□□□□ -1.11
APLF-202ENST00000394342 B8ZZF3 427 aa8.1□□□□□ -1.11
APLF-202ENST00000394342 K7EPI3 171 aa8.1□□□□□ -1.11
APLF-202ENST00000394342 SGK494L7N484 410 aa8.1□□□□□ -1.11
APLF-202ENST00000394342 SOCS6O14544 535 aa8.1□□□□□ -1.11
APLF-202ENST00000394342 KLK8O60259 260 aa8.1□□□□□ -1.11
APLF-202ENST00000394342 CCNT2O60583 730 aaKnown RBP8.1□□□□□ -1.11
APLF-202ENST00000394342 DNAJB5O75953 348 aa8.1□□□□□ -1.11
APLF-202ENST00000394342 KLHL18O94889 574 aa8.1□□□□□ -1.11
APLF-202ENST00000394342 SERPIND1P05546 499 aa8.1□□□□□ -1.11
APLF-202ENST00000394342 HEXBP07686 556 aa8.1□□□□□ -1.11
APLF-202ENST00000394342 RBP1P09455 135 aa8.1□□□□□ -1.11
APLF-202ENST00000394342 MYBL2P10244 700 aa8.1□□□□□ -1.11
APLF-202ENST00000394342 MTHFD2P13995 350 aa8.1□□□□□ -1.11
APLF-202ENST00000394342 GFAPP14136 432 aa8.1□□□□□ -1.11
APLF-202ENST00000394342 ALOX12P18054 663 aa8.1□□□□□ -1.11
APLF-202ENST00000394342 IL1RNP18510 177 aa8.1□□□□□ -1.11
APLF-202ENST00000394342 GCAP28676 217 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms