RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 DDX53Q86TM3 631 aaKnown RBP18.21■□□□□ 0.51
HOXC6-202ENST00000394331 ZNF366Q8N895 744 aa18.21■□□□□ 0.51
HOXC6-202ENST00000394331 ATAD1Q8NBU5 361 aa18.21■□□□□ 0.51
HOXC6-202ENST00000394331 ZBTB18Q99592 522 aa18.21■□□□□ 0.51
HOXC6-202ENST00000394331 ASPNQ9BXN1 380 aa18.21■□□□□ 0.51
HOXC6-202ENST00000394331 PCTPQ9UKL6 214 aa18.21■□□□□ 0.51
HOXC6-202ENST00000394331 IKZF3Q9UKT9 509 aa18.21■□□□□ 0.51
HOXC6-202ENST00000394331 ARL5AQ9Y689 179 aa18.21■□□□□ 0.51
HOXC6-202ENST00000394331 A0A1B0GVM2 712 aa18.21■□□□□ 0.51
HOXC6-202ENST00000394331 PI15O43692 258 aa18.21■□□□□ 0.51
HOXC6-202ENST00000394331 HCN1O60741 890 aa18.21■□□□□ 0.51
HOXC6-202ENST00000394331 HMBSP08397 361 aa18.21■□□□□ 0.51
HOXC6-202ENST00000394331 AZGP1P25311 298 aaKnown RBP18.21■□□□□ 0.51
HOXC6-202ENST00000394331 COMMD7Q86VX2 200 aa18.21■□□□□ 0.51
HOXC6-202ENST00000394331 STX19Q8N4C7 294 aa18.21■□□□□ 0.51
HOXC6-202ENST00000394331 OR56A4Q8NGH8 313 aa18.21■□□□□ 0.51
HOXC6-202ENST00000394331 OR4L1Q8NH43 312 aa18.21■□□□□ 0.51
HOXC6-202ENST00000394331 TRIM45Q9H8W5 580 aaPredicted RBP18.21■□□□□ 0.51
HOXC6-202ENST00000394331 ANKRD36A6QL64 1941 aa18.21■□□□□ 0.51
HOXC6-202ENST00000394331 MYO16Q9Y6X6 1858 aa18.21■□□□□ 0.5
HOXC6-202ENST00000394331 TTC3P53804 2025 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 OR6C75A6NL08 312 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 OR5K4A6NMS3 321 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 TSPAN4O14817 238 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 SLC43A1O75387 559 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 CCNDBP1O95273 360 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 TPOP07202 933 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 ACVRL1P37023 503 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 CLDN20P56880 219 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 RUNX1T1Q06455 604 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 TAF10Q12962 218 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 MRPL28Q13084 256 aaKnown RBP18.2■□□□□ 0.5
HOXC6-202ENST00000394331 COL28A1Q2UY09 1125 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 KIAA1324Q6UXG2 1013 aaKnown RBP18.2■□□□□ 0.5
HOXC6-202ENST00000394331 RTN4RL1Q86UN2 441 aaPredicted RBP18.2■□□□□ 0.5
HOXC6-202ENST00000394331 GHDCQ8N2G8 530 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 ATG16L2Q8NAA4 619 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 PCSK9Q8NBP7 692 aaKnown RBP18.2■□□□□ 0.5
HOXC6-202ENST00000394331 DENND6BQ8NEG7 585 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 AARSD1Q9BTE6 412 aaKnown RBP18.2■□□□□ 0.5
HOXC6-202ENST00000394331 SYNDIG1Q9H7V2 258 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 RRAGCQ9HB90 399 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 RBFOX1Q9NWB1 397 aaKnown RBP18.2■□□□□ 0.5
HOXC6-202ENST00000394331 WASHC1A8K0Z3 465 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 SUPT3HB4E1H0 165 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 PPM1BO75688 479 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 GPX5O75715 221 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 RPS19P39019 145 aaKnown RBP18.2■□□□□ 0.5
HOXC6-202ENST00000394331 MAP2K3P46734 347 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 ALDH9A1P49189 494 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 ARPP19P56211 112 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 HOXC5Q00444 222 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 GTF2H3Q13889 308 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 GRK1Q15835 563 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 MAPKAPK3Q16644 382 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 PDZK1Q5T2W1 519 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 LCN1P1Q5VSP4 162 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 IL31Q6EBC2 164 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 CIR1Q86X95 450 aaPredicted RBP18.2■□□□□ 0.5
HOXC6-202ENST00000394331 C1orf52Q8N6N3 182 aaKnown RBP18.2■□□□□ 0.5
HOXC6-202ENST00000394331 ZNF382Q96SR6 550 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 HTATIP2Q9BUP3 242 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 DERL2Q9GZP9 239 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 RACGAP1Q9H0H5 632 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 STUB1Q9UNE7 303 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 FKBP7Q9Y680 259 aa18.2■□□□□ 0.5
HOXC6-202ENST00000394331 MOXD2PA6NHM9 499 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 STSP08842 583 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 RPS3P23396 243 aaKnown RBP eCLIP18.19■□□□□ 0.5
HOXC6-202ENST00000394331 CST5P28325 142 aaPredicted RBP18.19■□□□□ 0.5
HOXC6-202ENST00000394331 STC1P52823 247 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.19■□□□□ 0.5
HOXC6-202ENST00000394331 FAM171A1Q5VUB5 890 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 GPR139Q6DWJ6 353 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 FAM131AQ6UXB0 335 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 GPRIN3Q6ZVF9 776 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 LINC00469Q8N7U9 141 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 LPCAT1Q8NF37 534 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 SH3RF2Q8TEC5 729 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 MSLNLQ96KJ4 702 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 MGLLQ99685 303 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 WASH6PQ9NQA3 447 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 GABRQQ9UN88 632 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 RPS10-NUDT3A0A1W2PQS6 291 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 PITPNM1O00562 1244 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 IL6P05231 212 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 FAM157BP0CG42 384 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 RRASP10301 218 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 PRDX3P30048 256 aaKnown RBP18.19■□□□□ 0.5
HOXC6-202ENST00000394331 FLT3LGP49771 235 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 GBX2P52951 348 aaPredicted RBP18.19■□□□□ 0.5
HOXC6-202ENST00000394331 FAM189BP81408 668 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 LAPTM4AQ15012 233 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 MZT2BQ6NZ67 158 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 OR8H3Q8N146 312 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 TTC9BQ8N6N2 239 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 OR13C4Q8NGS5 318 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 MARVELD1Q9BSK0 173 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 TSEN34Q9BSV6 310 aaKnown RBP18.19■□□□□ 0.5
HOXC6-202ENST00000394331 TTPALQ9BTX7 342 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms