RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 DHX34Q14147 1143 aaKnown RBP15.04■□□□□ -0
VCX3A-201ENST00000381089 HERC3Q15034 1050 aa15.04■□□□□ -0
VCX3A-201ENST00000381089 NIPAL1Q6NVV3 410 aa15.04■□□□□ -0
VCX3A-201ENST00000381089 MEX3BQ6ZN04 569 aaKnown RBP15.04■□□□□ -0
VCX3A-201ENST00000381089 RPS19BP1Q86WX3 136 aaKnown RBP15.04■□□□□ -0
VCX3A-201ENST00000381089 SIAH3Q8IW03 269 aa15.04■□□□□ -0
VCX3A-201ENST00000381089 PALM2Q8IXS6 379 aa15.04■□□□□ -0
VCX3A-201ENST00000381089 LRRC56Q8IYG6 542 aaPredicted RBP15.04■□□□□ -0
VCX3A-201ENST00000381089 SLC13A3Q8WWT9 602 aa15.04■□□□□ -0
VCX3A-201ENST00000381089 SDCCAG3Q96C92 435 aa15.04■□□□□ -0
VCX3A-201ENST00000381089 PEX11GQ96HA9 241 aa15.04■□□□□ -0
VCX3A-201ENST00000381089 CCDC138Q96M89 665 aa15.04■□□□□ -0
VCX3A-201ENST00000381089 NPAS2Q99743 824 aa15.04■□□□□ -0
VCX3A-201ENST00000381089 OLFM1Q99784 485 aa15.04■□□□□ -0
VCX3A-201ENST00000381089 TRIM51Q9BSJ1 452 aa15.04■□□□□ -0
VCX3A-201ENST00000381089 CDCP1Q9H5V8 836 aa15.04■□□□□ -0
VCX3A-201ENST00000381089 DHRS7Q9Y394 339 aa15.04■□□□□ -0
VCX3A-201ENST00000381089 NAALAD2Q9Y3Q0 740 aa15.04■□□□□ -0
VCX3A-201ENST00000381089 SLC22A7Q9Y694 548 aa15.04■□□□□ -0
VCX3A-201ENST00000381089 SETD2Q9BYW2 2564 aaPredicted RBP15.03■□□□□ -0
VCX3A-201ENST00000381089 MAGEB16A2A368 324 aa15.03■□□□□ -0
VCX3A-201ENST00000381089 PABPN1LA6NDY0 278 aaKnown RBP15.03■□□□□ -0
VCX3A-201ENST00000381089 OR2W5A6NFC9 320 aa15.03■□□□□ -0
VCX3A-201ENST00000381089 NME2P1O60361 137 aa15.03■□□□□ -0
VCX3A-201ENST00000381089 KRT38O76015 456 aa15.03■□□□□ -0
VCX3A-201ENST00000381089 NEURL1O76050 574 aa15.03■□□□□ -0
VCX3A-201ENST00000381089 NME2P22392 152 aa15.03■□□□□ -0
VCX3A-201ENST00000381089 SLC26A5P58743 744 aa15.03■□□□□ -0
VCX3A-201ENST00000381089 CSNK1G2P78368 415 aa15.03■□□□□ -0
VCX3A-201ENST00000381089 MPP1Q00013 466 aa15.03■□□□□ -0
VCX3A-201ENST00000381089 MEF2AQ02078 507 aaPredicted RBP15.03■□□□□ -0
VCX3A-201ENST00000381089 RHAGQ02094 409 aa15.03■□□□□ -0
VCX3A-201ENST00000381089 CDSNQ15517 529 aa15.03■□□□□ -0
VCX3A-201ENST00000381089 CAPN13Q6MZZ7 669 aaPredicted RBP15.03■□□□□ -0
VCX3A-201ENST00000381089 DOLPP1Q86YN1 238 aa15.03■□□□□ -0
VCX3A-201ENST00000381089 TBC1D19Q8N5T2 526 aa15.03■□□□□ -0
VCX3A-201ENST00000381089 POGLUT1Q8NBL1 392 aa15.03■□□□□ -0
VCX3A-201ENST00000381089 GIMAP7Q8NHV1 300 aa15.03■□□□□ -0
VCX3A-201ENST00000381089 TRIM44Q96DX7 344 aaPredicted RBP15.03■□□□□ -0
VCX3A-201ENST00000381089 TM4SF19Q96DZ7 209 aa15.03■□□□□ -0
VCX3A-201ENST00000381089 SLC30A3Q99726 388 aa15.03■□□□□ -0
VCX3A-201ENST00000381089 MACROD1Q9BQ69 325 aa15.03■□□□□ -0
VCX3A-201ENST00000381089 RBCK1Q9BYM8 510 aa15.03■□□□□ -0
VCX3A-201ENST00000381089 ENKD1Q9H0I2 346 aa15.03■□□□□ -0
VCX3A-201ENST00000381089 SCN3AQ9NY46 2000 aa15.03■□□□□ -0
VCX3A-201ENST00000381089 FEZF1A0PJY2 475 aa15.02■□□□□ -0
VCX3A-201ENST00000381089 FOXO6A8MYZ6 492 aa15.02■□□□□ -0
VCX3A-201ENST00000381089 FCHO1O14526 889 aa15.02■□□□□ -0
VCX3A-201ENST00000381089 TFECO14948 347 aaPredicted RBP15.02■□□□□ -0
VCX3A-201ENST00000381089 MAN1A2O60476 641 aa15.02■□□□□ -0
VCX3A-201ENST00000381089 FHP07954 510 aa15.02■□□□□ -0
VCX3A-201ENST00000381089 ST13P50502 369 aaKnown RBP15.02■□□□□ -0
VCX3A-201ENST00000381089 TESK1Q15569 626 aa15.02■□□□□ -0
VCX3A-201ENST00000381089 TMEM211Q6ICI0 200 aa15.02■□□□□ -0
VCX3A-201ENST00000381089 UGT3A1Q6NUS8 523 aa15.02■□□□□ -0
VCX3A-201ENST00000381089 ZNF662Q6ZS27 426 aa15.02■□□□□ -0
VCX3A-201ENST00000381089 SLC26A11Q86WA9 606 aa15.02■□□□□ -0
VCX3A-201ENST00000381089 LMNTD2Q8IXW0 634 aa15.02■□□□□ -0
VCX3A-201ENST00000381089 KCT2Q8NC54 265 aa15.02■□□□□ -0
VCX3A-201ENST00000381089 CALML6Q8TD86 181 aa15.02■□□□□ -0
VCX3A-201ENST00000381089 ZNF669Q96BR6 464 aaPredicted RBP15.02■□□□□ -0
VCX3A-201ENST00000381089 TBC1D20Q96BZ9 403 aa15.02■□□□□ -0
VCX3A-201ENST00000381089 DMRTA2Q96SC8 542 aa15.02■□□□□ -0
VCX3A-201ENST00000381089 GPR21Q99679 349 aa15.02■□□□□ -0
VCX3A-201ENST00000381089 FBXO6Q9NRD1 293 aaPredicted RBP15.02■□□□□ -0
VCX3A-201ENST00000381089 HOMER3Q9NSC5 361 aa15.02■□□□□ -0
VCX3A-201ENST00000381089 KLF13Q9Y2Y9 288 aaPredicted RBP15.02■□□□□ -0
VCX3A-201ENST00000381089 ZFHX3Q15911 3703 aa15.01□□□□□ -0.01
VCX3A-201ENST00000381089 FAM237BA0A1B0GVD1 139 aa15.01□□□□□ -0.01
VCX3A-201ENST00000381089 KLRC4-KLRK1H3BQV0 150 aa15.01□□□□□ -0.01
VCX3A-201ENST00000381089 C8GP07360 202 aa15.01□□□□□ -0.01
VCX3A-201ENST00000381089 CD1EP15812 388 aa15.01□□□□□ -0.01
VCX3A-201ENST00000381089 TPP2P29144 1249 aaPredicted RBP15.01□□□□□ -0.01
VCX3A-201ENST00000381089 PTGS2P35354 604 aa15.01□□□□□ -0.01
VCX3A-201ENST00000381089 COILP38432 576 aaPredicted RBP15.01□□□□□ -0.01
VCX3A-201ENST00000381089 RGS4P49798 205 aa15.01□□□□□ -0.01
VCX3A-201ENST00000381089 KRTAP10-9P60411 292 aa15.01□□□□□ -0.01
VCX3A-201ENST00000381089 SNRPNP63162 240 aaKnown RBP15.01□□□□□ -0.01
VCX3A-201ENST00000381089 HSF1Q00613 529 aa15.01□□□□□ -0.01
VCX3A-201ENST00000381089 CTBP1Q13363 440 aa15.01□□□□□ -0.01
VCX3A-201ENST00000381089 SIX1Q15475 284 aaPredicted RBP15.01□□□□□ -0.01
VCX3A-201ENST00000381089 CYHR1Q6ZMK1 362 aa15.01□□□□□ -0.01
VCX3A-201ENST00000381089 C3P1Q6ZMU1 363 aa15.01□□□□□ -0.01
VCX3A-201ENST00000381089 NCCRP1Q6ZVX7 275 aaPredicted RBP15.01□□□□□ -0.01
VCX3A-201ENST00000381089 PIWIL4Q7Z3Z4 852 aaKnown RBP15.01□□□□□ -0.01
VCX3A-201ENST00000381089 PDSS2Q86YH6 399 aa15.01□□□□□ -0.01
VCX3A-201ENST00000381089 CPNE9Q8IYJ1 553 aa15.01□□□□□ -0.01
VCX3A-201ENST00000381089 CPSF7Q8N684 471 aaKnown RBP15.01□□□□□ -0.01
VCX3A-201ENST00000381089 MFSD9Q8NBP5 474 aa15.01□□□□□ -0.01
VCX3A-201ENST00000381089 ELP5Q8TE02 316 aa15.01□□□□□ -0.01
VCX3A-201ENST00000381089 ASB5Q8WWX0 329 aa15.01□□□□□ -0.01
VCX3A-201ENST00000381089 TSLPQ969D9 159 aa15.01□□□□□ -0.01
VCX3A-201ENST00000381089 ALKBH8Q96BT7 664 aaKnown RBP15.01□□□□□ -0.01
VCX3A-201ENST00000381089 HAUS8Q9BT25 410 aa15.01□□□□□ -0.01
VCX3A-201ENST00000381089 LANCL2Q9NS86 450 aa15.01□□□□□ -0.01
VCX3A-201ENST00000381089 TRMT6Q9UJA5 497 aaKnown RBP15.01□□□□□ -0.01
VCX3A-201ENST00000381089 TCRBV7S3A2A0A539 114 aa15□□□□□ -0.01
VCX3A-201ENST00000381089 ZNF860A6NHJ4 632 aa15□□□□□ -0.01
VCX3A-201ENST00000381089 SDR42E2A6NKP2 422 aa15□□□□□ -0.01
VCX3A-201ENST00000381089 NDUFS4O43181 175 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms