RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 CPA6Q8N4T0 437 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 SMPDL3AQ92484 453 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 UTP4Q969X6 686 aaKnown RBP8.13□□□□□ -1.11
VPS36-201ENST00000378060 L3HYPDHQ96EM0 354 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 RBM18Q96H35 190 aaKnown RBP8.13□□□□□ -1.11
VPS36-201ENST00000378060 DEFB118Q96PH6 123 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 C16orf70Q9BSU1 422 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 ELL3Q9HB65 397 aaPredicted RBP8.13□□□□□ -1.11
VPS36-201ENST00000378060 SLC35C2Q9NQQ7 365 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 PCDHGB6Q9Y5F9 930 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 HEBP2Q9Y5Z4 205 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 FAM25EA8MYX2 175 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 G3V2L1 256 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 CLDN7O95471 211 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 EPHX1P07099 455 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 ELK4P28324 431 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 CSTF1Q05048 431 aaKnown RBP8.12□□□□□ -1.11
VPS36-201ENST00000378060 ST3GAL3Q11203 375 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 IRF5Q13568 498 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 PLEKHS1Q5SXH7 462 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 CGB2Q6NT52 195 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 BORAQ6PGQ7 559 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 CEACAM20Q6UY09 585 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 ZNF783Q6ZMS7 281 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 NCCRP1Q6ZVX7 275 aaPredicted RBP8.12□□□□□ -1.11
VPS36-201ENST00000378060 ZNF367Q7RTV3 350 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 PARGQ86W56 976 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 GALNT12Q8IXK2 581 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 COX18Q8N8Q8 333 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 SLC22A18Q96BI1 424 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 RNF31Q96EP0 1072 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 CACNG4Q9UBN1 327 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 MALT1Q9UDY8 824 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 AGRPO00253 132 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 MAFKO60675 156 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 TPST2O60704 377 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 SEMA3DO95025 777 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 CDRT1O95170 752 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 S100A6P06703 90 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 FGF4P08620 206 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 CHRM1P11229 460 aaPredicted RBP8.12□□□□□ -1.11
VPS36-201ENST00000378060 CPN2P22792 545 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 NCBP2P52298 156 aaKnown RBP eCLIP8.12□□□□□ -1.113e-6■□□□□ 10.1
VPS36-201ENST00000378060 PITX1P78337 314 aaPredicted RBP8.12□□□□□ -1.11
VPS36-201ENST00000378060 FADDQ13158 208 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 CTC1Q2NKJ3 1217 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 LIPJQ5W064 366 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 NOXRED1Q6NXP6 359 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 TSEN15Q8WW01 171 aaKnown RBP8.12□□□□□ -1.11
VPS36-201ENST00000378060 EFHD2Q96C19 240 aaPredicted RBP8.12□□□□□ -1.11
VPS36-201ENST00000378060 OR2AG1Q9H205 316 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 DPAGT1Q9H3H5 408 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 RC3H2Q9HBD1 1191 aaKnown RBP8.12□□□□□ -1.11
VPS36-201ENST00000378060 PAK1IP1Q9NWT1 392 aaPredicted RBP8.12□□□□□ -1.11
VPS36-201ENST00000378060 MAP10Q9P2G4 905 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 GRIP1Q9Y3R0 1128 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 DNAJC15Q9Y5T4 150 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 GRXCR2A6NFK2 248 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 ANXA2P2A6NMY6 339 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 DIRAS1O95057 198 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 ANXA2P07355 339 aaKnown RBP8.12□□□□□ -1.11
VPS36-201ENST00000378060 TACSTD2P09758 323 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 F8A1P23610 371 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 S100GP29377 79 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 ZNF763Q0D2J5 394 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 ST3GAL4Q11206 333 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 NFATC3Q12968 1075 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 MADCAM1Q13477 382 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 FBXO42Q6P3S6 717 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 KLHL24Q6TFL4 600 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 C14orf80Q86SX3 495 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 SYVN1Q86TM6 617 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 ATCAYQ86WG3 371 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 GPALPP1Q8IXQ4 340 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 RGL4Q8IZJ4 473 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 NFKBIDQ8NI38 313 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 ZSWIM3Q96MP5 696 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 TMEM175Q9BSA9 504 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 KCNK13Q9HB14 408 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 ZDHHC4Q9NPG8 344 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 TRIM36Q9NQ86 728 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 FAIMQ9NVQ4 179 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 FAM118AQ9NWS6 357 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 MARK1Q9P0L2 795 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 YIPF1Q9Y548 306 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 PCDHGB5Q9Y5G0 923 aa8.12□□□□□ -1.11
VPS36-201ENST00000378060 ZBTB42B2RXF5 422 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 GRID2O43424 1007 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 ITGA10O75578 1167 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 PORP16435 677 aaPredicted RBP8.11□□□□□ -1.11
VPS36-201ENST00000378060 RPL17P18621 184 aaKnown RBP8.11□□□□□ -1.11
VPS36-201ENST00000378060 FDXRP22570 491 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 VIPR1P32241 457 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 AGTR2P50052 363 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 EIF5AP63241 154 aaKnown RBP8.11□□□□□ -1.11
VPS36-201ENST00000378060 TXNL4AP83876 142 aaKnown RBP8.11□□□□□ -1.11
VPS36-201ENST00000378060 ILF3Q12906 894 aaKnown RBP eCLIP8.11□□□□□ -1.11
VPS36-201ENST00000378060 DNASE1L3Q13609 305 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 SWI5Q1ZZU3 235 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 RUNDC3AQ59EK9 446 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms