RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 SNTG1Q9NSN8 517 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 DDX60Q8IY21 1712 aaKnown RBP10.48□□□□□ -0.73
HIF3A-205ENST00000377670 MID1O15344 667 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 NR2C1P13056 603 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 ACY1Q03154 408 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 MERTKQ12866 999 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 HERC3Q15034 1050 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 MLF2Q15773 248 aaPredicted RBP10.48□□□□□ -0.73
HIF3A-205ENST00000377670 GFOD2Q3B7J2 385 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 RTP2Q5QGT7 225 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 MARCH8Q5T0T0 291 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 LRRC66Q68CR7 880 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 SVOPLQ8N434 492 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 NTAN1Q96AB6 310 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 RGMAQ96B86 450 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 CDK15Q96Q40 435 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 C11orf16Q9NQ32 467 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 PISDQ9UG56 409 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 TNRC6CQ9HCJ0 1690 aaKnown RBP10.48□□□□□ -0.73
HIF3A-205ENST00000377670 TNFRSF10BO14763 440 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 PDPK1O15530 556 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 CPNE3O75131 537 aaKnown RBP10.48□□□□□ -0.73
HIF3A-205ENST00000377670 SIX3O95343 332 aaPredicted RBP10.48□□□□□ -0.73
HIF3A-205ENST00000377670 CHRM5P08912 532 aaPredicted RBP10.48□□□□□ -0.73
HIF3A-205ENST00000377670 HOXB6P17509 224 aaKnown RBP10.48□□□□□ -0.73
HIF3A-205ENST00000377670 VSX2P58304 361 aaPredicted RBP10.48□□□□□ -0.73
HIF3A-205ENST00000377670 MC1RQ01726 317 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 SLC9B1Q4ZJI4 515 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 UBAP2Q5T6F2 1119 aaKnown RBP10.48□□□□□ -0.73
HIF3A-205ENST00000377670 LSM14AQ8ND56 463 aaKnown RBP10.48□□□□□ -0.73
HIF3A-205ENST00000377670 RADILQ96JH8 1075 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 SMOC2Q9H3U7 446 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 FZD3Q9NPG1 666 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 CKLFQ9UBR5 152 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 GLS2Q9UI32 602 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 MAP4K5Q9Y4K4 846 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 PSAT1Q9Y617 370 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 COL2A1P02458 1487 aaPredicted RBP10.48□□□□□ -0.73
HIF3A-205ENST00000377670 OR6C74A6NCV1 312 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 TRIM64A6NGJ6 449 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 EI24O14681 340 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 POLR1CO15160 346 aaPredicted RBP10.48□□□□□ -0.73
HIF3A-205ENST00000377670 KDELR3O43731 214 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 SCGNO76038 276 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 COL6A2P12110 1019 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 ABOP16442 354 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 MNDAP41218 407 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 NCBP2P52298 156 aaKnown RBP eCLIP10.48□□□□□ -0.73
HIF3A-205ENST00000377670 OR4D2P58180 307 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 ZNF252P-AS1Q0IIN9 211 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 MRPL49Q13405 166 aaKnown RBP10.48□□□□□ -0.73
HIF3A-205ENST00000377670 RCAN2Q14206 197 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 KCNJ11Q14654 390 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 CHRNA6Q15825 494 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 ULK3Q6PHR2 472 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 ROPN1LQ96C74 230 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 ZSWIM3Q96MP5 696 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 RNF38Q9H0F5 515 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 MAGEE1Q9HCI5 957 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 OR6C70A6NIJ9 312 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 PCDHGA12O60330 932 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 ZNF623O75123 536 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 KDM4BO94953 1096 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 P04436 131 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 LINGO3P0C6S8 592 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 POU2F1P14859 743 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 NUDT1P36639 197 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 RAB15P59190 212 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 GTF2H2Q13888 395 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 IL23RQ5VWK5 629 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 SLC30A6Q6NXT4 461 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 GTF2H2CQ6P1K8 395 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 LYSMD3Q7Z3D4 306 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 AMIGO1Q86WK6 493 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 ZZZ3Q8IYH5 903 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 CLDN19Q8N6F1 224 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 TNFAIP8L1Q8WVP5 186 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 NAT6Q93015 286 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 PYCR2Q96C36 320 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 TOE1Q96GM8 510 aaKnown RBP10.48□□□□□ -0.73
HIF3A-205ENST00000377670 SLC29A3Q9BZD2 475 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 LIN28AQ9H9Z2 209 aaKnown RBP10.48□□□□□ -0.73
HIF3A-205ENST00000377670 Q9N2J8 555 aa10.48□□□□□ -0.73
HIF3A-205ENST00000377670 OR14I1A6ND48 311 aa10.47□□□□□ -0.73
HIF3A-205ENST00000377670 SHISA7A6NL88 538 aa10.47□□□□□ -0.73
HIF3A-205ENST00000377670 ITM2AO43736 263 aa10.47□□□□□ -0.73
HIF3A-205ENST00000377670 CD83Q01151 205 aa10.47□□□□□ -0.73
HIF3A-205ENST00000377670 DLG1Q12959 904 aa10.47□□□□□ -0.73
HIF3A-205ENST00000377670 LRRTM3Q86VH5 581 aa10.47□□□□□ -0.73
HIF3A-205ENST00000377670 EID2Q8N6I1 236 aa10.47□□□□□ -0.73
HIF3A-205ENST00000377670 RASSF5Q8WWW0 418 aa10.47□□□□□ -0.73
HIF3A-205ENST00000377670 NXPE3Q969Y0 559 aa10.47□□□□□ -0.73
HIF3A-205ENST00000377670 GTPBP3Q969Y2 492 aaKnown RBP10.47□□□□□ -0.73
HIF3A-205ENST00000377670 SLC35G5Q96KT7 338 aa10.47□□□□□ -0.73
HIF3A-205ENST00000377670 ERMAPQ96PL5 475 aaPredicted RBP10.47□□□□□ -0.73
HIF3A-205ENST00000377670 PRODHO43272 600 aa10.47□□□□□ -0.73
HIF3A-205ENST00000377670 CLDN7O95471 211 aa10.47□□□□□ -0.73
HIF3A-205ENST00000377670 ZNF806P0C7X5 589 aa10.47□□□□□ -0.73
HIF3A-205ENST00000377670 IL7RP16871 459 aa10.47□□□□□ -0.73
HIF3A-205ENST00000377670 CEBPBP17676 345 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms