RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 RHAGQ02094 409 aa16.85■□□□□ 0.29
COMMD6-202ENST00000377612 HYAL2Q12891 473 aa16.85■□□□□ 0.29
COMMD6-202ENST00000377612 CDC16Q13042 620 aa16.85■□□□□ 0.29
COMMD6-202ENST00000377612 TSNQ15631 228 aaKnown RBP16.85■□□□□ 0.29
COMMD6-202ENST00000377612 ANKRD53Q8N9V6 530 aa16.85■□□□□ 0.29
COMMD6-202ENST00000377612 TSLPQ969D9 159 aa16.85■□□□□ 0.29
COMMD6-202ENST00000377612 LMF1Q96S06 567 aa16.85■□□□□ 0.29
COMMD6-202ENST00000377612 RHOJQ9H4E5 214 aa16.85■□□□□ 0.29
COMMD6-202ENST00000377612 CAB39LQ9H9S4 337 aa16.85■□□□□ 0.29
COMMD6-202ENST00000377612 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.85■□□□□ 0.298e-24■■■■■ 41.4
COMMD6-202ENST00000377612 OR1F1O43749 312 aa16.84■□□□□ 0.29
COMMD6-202ENST00000377612 CDC123O75794 336 aaPredicted RBP16.84■□□□□ 0.29
COMMD6-202ENST00000377612 LDLRP01130 860 aa16.84■□□□□ 0.29
COMMD6-202ENST00000377612 GMPRP36959 345 aa16.84■□□□□ 0.29
COMMD6-202ENST00000377612 TNFSF10P50591 281 aa16.84■□□□□ 0.29
COMMD6-202ENST00000377612 TLR1Q15399 786 aa16.84■□□□□ 0.29
COMMD6-202ENST00000377612 MFSD4BQ5TF39 518 aa16.84■□□□□ 0.29
COMMD6-202ENST00000377612 CPEB2Q7Z5Q1 589 aaKnown RBP16.84■□□□□ 0.29
COMMD6-202ENST00000377612 ANKRD37Q7Z713 158 aa16.84■□□□□ 0.29
COMMD6-202ENST00000377612 TMPRSS11BQ86T26 416 aa16.84■□□□□ 0.29
COMMD6-202ENST00000377612 THOC6Q86W42 341 aaKnown RBP16.84■□□□□ 0.29
COMMD6-202ENST00000377612 SPATA4Q8NEY3 305 aa16.84■□□□□ 0.29
COMMD6-202ENST00000377612 NT5CQ8TCD5 201 aa16.84■□□□□ 0.29
COMMD6-202ENST00000377612 PEX11GQ96HA9 241 aa16.84■□□□□ 0.29
COMMD6-202ENST00000377612 TAAR6Q96RI8 345 aa16.84■□□□□ 0.29
COMMD6-202ENST00000377612 CYTH2Q99418 400 aa16.84■□□□□ 0.29
COMMD6-202ENST00000377612 TUBB6Q9BUF5 446 aa16.84■□□□□ 0.29
COMMD6-202ENST00000377612 LRRC4CQ9HCJ2 640 aa16.84■□□□□ 0.29
COMMD6-202ENST00000377612 SAYSD1Q9NPB0 183 aa16.84■□□□□ 0.29
COMMD6-202ENST00000377612 RNF14Q9UBS8 474 aa16.84■□□□□ 0.29
COMMD6-202ENST00000377612 PLEKHB1Q9UF11 243 aaPredicted RBP16.84■□□□□ 0.29
COMMD6-202ENST00000377612 OARD1Q9Y530 152 aa16.84■□□□□ 0.29
COMMD6-202ENST00000377612 SLC22A7Q9Y694 548 aa16.84■□□□□ 0.29
COMMD6-202ENST00000377612 NCOA6Q14686 2063 aaPredicted RBP16.84■□□□□ 0.29
COMMD6-202ENST00000377612 CRYBG3Q68DQ2 2970 aa16.83■□□□□ 0.29
COMMD6-202ENST00000377612 A1L4Q6 167 aa16.83■□□□□ 0.28
COMMD6-202ENST00000377612 PCDH17O14917 1159 aa16.83■□□□□ 0.28
COMMD6-202ENST00000377612 GALR3O60755 368 aaPredicted RBP16.83■□□□□ 0.28
COMMD6-202ENST00000377612 WDPCPO95876 746 aa16.83■□□□□ 0.28
COMMD6-202ENST00000377612 ZNF888P0CJ79 500 aaPredicted RBP16.83■□□□□ 0.28
COMMD6-202ENST00000377612 GRK3P35626 688 aa16.83■□□□□ 0.28
COMMD6-202ENST00000377612 SLC6A12P48065 614 aa16.83■□□□□ 0.28
COMMD6-202ENST00000377612 ARG2P78540 354 aa16.83■□□□□ 0.28
COMMD6-202ENST00000377612 DEFB134Q4QY38 66 aa16.83■□□□□ 0.28
COMMD6-202ENST00000377612 RIPOR1Q6ZS17 1223 aa16.83■□□□□ 0.28
COMMD6-202ENST00000377612 ST6GALNAC3Q8NDV1 305 aa16.83■□□□□ 0.28
COMMD6-202ENST00000377612 ATL1Q8WXF7 558 aa16.83■□□□□ 0.28
COMMD6-202ENST00000377612 PCNX1Q96RV3 2341 aa16.83■□□□□ 0.28
COMMD6-202ENST00000377612 NPAS2Q99743 824 aa16.83■□□□□ 0.28
COMMD6-202ENST00000377612 SLX1AQ9BQ83 275 aa16.83■□□□□ 0.28
COMMD6-202ENST00000377612 ERP44Q9BS26 406 aa16.83■□□□□ 0.28
COMMD6-202ENST00000377612 TMEM79Q9BSE2 394 aa16.83■□□□□ 0.28
COMMD6-202ENST00000377612 TRIM54Q9BYV2 358 aa16.83■□□□□ 0.28
COMMD6-202ENST00000377612 SLC6A16Q9GZN6 736 aa16.83■□□□□ 0.28
COMMD6-202ENST00000377612 WHRNQ9P202 907 aa16.83■□□□□ 0.28
COMMD6-202ENST00000377612 SLC22A14Q9Y267 594 aa16.83■□□□□ 0.28
COMMD6-202ENST00000377612 MTO1Q9Y2Z2 717 aaKnown RBP16.83■□□□□ 0.28
COMMD6-202ENST00000377612 FAM187AA6NFU0 413 aa16.82■□□□□ 0.28
COMMD6-202ENST00000377612 WIPF3A6NGB9 483 aa16.82■□□□□ 0.28
COMMD6-202ENST00000377612 PHGDHO43175 533 aaKnown RBP16.82■□□□□ 0.28
COMMD6-202ENST00000377612 MAN1A2O60476 641 aa16.82■□□□□ 0.28
COMMD6-202ENST00000377612 CYC1P08574 325 aa16.82■□□□□ 0.28
COMMD6-202ENST00000377612 GDF5P43026 501 aa16.82■□□□□ 0.28
COMMD6-202ENST00000377612 ST13P50502 369 aaKnown RBP16.82■□□□□ 0.28
COMMD6-202ENST00000377612 TDGF1P3P51864 188 aa16.82■□□□□ 0.28
COMMD6-202ENST00000377612 GPX6P59796 221 aa16.82■□□□□ 0.28
COMMD6-202ENST00000377612 CDKL1Q00532 357 aa16.82■□□□□ 0.28
COMMD6-202ENST00000377612 SRSF11Q05519 484 aaKnown RBP16.82■□□□□ 0.28
COMMD6-202ENST00000377612 TRADDQ15628 312 aa16.82■□□□□ 0.28
COMMD6-202ENST00000377612 ZNF324BQ6AW86 544 aaPredicted RBP16.82■□□□□ 0.28
COMMD6-202ENST00000377612 FCRLBQ6BAA4 426 aa16.82■□□□□ 0.28
COMMD6-202ENST00000377612 KLHDC8AQ8IYD2 350 aa16.82■□□□□ 0.28
COMMD6-202ENST00000377612 SPATA6LQ8N4H0 392 aa16.82■□□□□ 0.28
COMMD6-202ENST00000377612 NKAPQ8N5F7 415 aaKnown RBP16.82■□□□□ 0.28
COMMD6-202ENST00000377612 OR1N1Q8NGS0 311 aa16.82■□□□□ 0.28
COMMD6-202ENST00000377612 UTP15Q8TED0 518 aaKnown RBP16.82■□□□□ 0.28
COMMD6-202ENST00000377612 FAR1Q8WVX9 515 aa16.82■□□□□ 0.28
COMMD6-202ENST00000377612 RHBDF1Q96CC6 855 aa16.82■□□□□ 0.28
COMMD6-202ENST00000377612 FAM129AQ9BZQ8 928 aa16.82■□□□□ 0.28
COMMD6-202ENST00000377612 KLHL31Q9H511 634 aa16.82■□□□□ 0.28
COMMD6-202ENST00000377612 PELI2Q9HAT8 420 aa16.82■□□□□ 0.28
COMMD6-202ENST00000377612 POPDC3Q9HBV1 291 aa16.82■□□□□ 0.28
COMMD6-202ENST00000377612 ZFP69BQ9UJL9 534 aa16.82■□□□□ 0.28
COMMD6-202ENST00000377612 TCRBV9S1A1TA0A576 114 aa16.81■□□□□ 0.28
COMMD6-202ENST00000377612 PABPN1LA6NDY0 278 aaKnown RBP16.81■□□□□ 0.28
COMMD6-202ENST00000377612 PRAMEF4O60810 478 aa16.81■□□□□ 0.28
COMMD6-202ENST00000377612 CLDN1O95832 211 aa16.81■□□□□ 0.28
COMMD6-202ENST00000377612 SERPIND1P05546 499 aa16.81■□□□□ 0.28
COMMD6-202ENST00000377612 ALOX12P18054 663 aa16.81■□□□□ 0.28
COMMD6-202ENST00000377612 AHRP35869 848 aa16.81■□□□□ 0.28
COMMD6-202ENST00000377612 PWP1Q13610 501 aa16.81■□□□□ 0.28
COMMD6-202ENST00000377612 CSHL1Q14406 222 aa16.81■□□□□ 0.28
COMMD6-202ENST00000377612 HERC3Q15034 1050 aa16.81■□□□□ 0.28
COMMD6-202ENST00000377612 FBXO48Q5FWF7 155 aa16.81■□□□□ 0.28
COMMD6-202ENST00000377612 PRAMEF9Q5VWM5 478 aa16.81■□□□□ 0.28
COMMD6-202ENST00000377612 PLAG1Q6DJT9 500 aa16.81■□□□□ 0.28
COMMD6-202ENST00000377612 RPUSD3Q6P087 351 aaKnown RBP16.81■□□□□ 0.28
COMMD6-202ENST00000377612 NXPE4Q6UWF7 544 aa16.81■□□□□ 0.28
COMMD6-202ENST00000377612 ZDHHC24Q6UX98 284 aa16.81■□□□□ 0.28
COMMD6-202ENST00000377612 ADAMTSL2Q86TH1 951 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms