RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 NDNFQ8TB73 568 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 DCAF13Q9NV06 445 aaKnown RBP13.47□□□□□ -0.25
MSH5-202ENST00000375740 THG1LQ9NWX6 298 aaKnown RBP13.47□□□□□ -0.25
MSH5-202ENST00000375740 ZNF229Q9UJW7 825 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 ANTXRLA6NF34 631 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 MAGEB17A8MXT2 336 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 LZTS3O60299 673 aaPredicted RBP13.47□□□□□ -0.25
MSH5-202ENST00000375740 ETHE1O95571 254 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 ALBP02768 609 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 ALOX5P09917 674 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 C6P13671 934 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 MAGP20916 626 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 NRIP1P48552 1158 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 ARSFP54793 590 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 ELP6Q0PNE2 266 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 MTAPQ13126 283 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 SLC14A1Q13336 389 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 GPM6BQ13491 265 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 TUBA3CQ13748 450 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 ZNF234Q14588 700 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 MEP1AQ16819 746 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 STK32CQ86UX6 486 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 TRAPPC5Q8IUR0 188 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 NPAS3Q8IXF0 933 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 ZCCHC7Q8N3Z6 543 aaKnown RBP13.47□□□□□ -0.25
MSH5-202ENST00000375740 CDC26Q8NHZ8 85 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 ZNF480Q8WV37 535 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 ASB16Q96NS5 453 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 MIR1-1HGQ9H1L0 117 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 TRIT1Q9H3H1 467 aaKnown RBP13.47□□□□□ -0.25
MSH5-202ENST00000375740 MARCH7Q9H992 704 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 PRM3Q9NNZ6 103 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 RUVBL1Q9Y265 456 aaKnown RBP13.47□□□□□ -0.25
MSH5-202ENST00000375740 PCDHGA8Q9Y5G5 932 aa13.47□□□□□ -0.25
MSH5-202ENST00000375740 ALPK3Q96L96 1907 aa13.46□□□□□ -0.25
MSH5-202ENST00000375740 FPGTO14772 594 aa13.46□□□□□ -0.25
MSH5-202ENST00000375740 SERPINA1P01009 418 aa13.46□□□□□ -0.25
MSH5-202ENST00000375740 CST1P01037 141 aa13.46□□□□□ -0.25
MSH5-202ENST00000375740 ADRB3P13945 408 aa13.46□□□□□ -0.25
MSH5-202ENST00000375740 IST1P53990 364 aa13.46□□□□□ -0.25
MSH5-202ENST00000375740 GP2P55259 537 aaKnown RBP13.46□□□□□ -0.25
MSH5-202ENST00000375740 WNT3P56703 355 aa13.46□□□□□ -0.25
MSH5-202ENST00000375740 SRSF11Q05519 484 aaKnown RBP13.46□□□□□ -0.25
MSH5-202ENST00000375740 ACSM2AQ08AH3 577 aa13.46□□□□□ -0.25
MSH5-202ENST00000375740 ABHD18Q0P651 414 aa13.46□□□□□ -0.25
MSH5-202ENST00000375740 DUOXA1Q1HG43 343 aa13.46□□□□□ -0.25
MSH5-202ENST00000375740 LRIT3Q3SXY7 679 aa13.46□□□□□ -0.25
MSH5-202ENST00000375740 BCL7AQ4VC05 210 aa13.46□□□□□ -0.25
MSH5-202ENST00000375740 ACSM2BQ68CK6 577 aa13.46□□□□□ -0.25
MSH5-202ENST00000375740 OR7G3Q8NG95 312 aa13.46□□□□□ -0.25
MSH5-202ENST00000375740 PNPT1Q8TCS8 783 aaKnown RBP13.46□□□□□ -0.25
MSH5-202ENST00000375740 NEIL2Q969S2 332 aa13.46□□□□□ -0.25
MSH5-202ENST00000375740 NRBF2Q96F24 287 aa13.46□□□□□ -0.25
MSH5-202ENST00000375740 WDR12Q9GZL7 423 aaKnown RBP13.46□□□□□ -0.25
MSH5-202ENST00000375740 ZDHHC4Q9NPG8 344 aa13.46□□□□□ -0.25
MSH5-202ENST00000375740 EXD2Q9NVH0 621 aa13.46□□□□□ -0.25
MSH5-202ENST00000375740 DNAJB9Q9UBS3 223 aa13.46□□□□□ -0.25
MSH5-202ENST00000375740 SCN2BO60939 215 aa13.46□□□□□ -0.26
MSH5-202ENST00000375740 CA3P07451 260 aa13.46□□□□□ -0.26
MSH5-202ENST00000375740 RETP07949 1114 aa13.46□□□□□ -0.26
MSH5-202ENST00000375740 COX7A2P14406 83 aa13.46□□□□□ -0.26
MSH5-202ENST00000375740 GSTM2P28161 218 aa13.46□□□□□ -0.26
MSH5-202ENST00000375740 MAPK9P45984 424 aa13.46□□□□□ -0.26
MSH5-202ENST00000375740 ALDH3A2P51648 485 aa13.46□□□□□ -0.26
MSH5-202ENST00000375740 PCDH1Q08174 1060 aa13.46□□□□□ -0.26
MSH5-202ENST00000375740 LAPTM5Q13571 262 aa13.46□□□□□ -0.26
MSH5-202ENST00000375740 TSTA3Q13630 321 aaPredicted RBP13.46□□□□□ -0.26
MSH5-202ENST00000375740 DAG1Q14118 895 aa13.46□□□□□ -0.26
MSH5-202ENST00000375740 ELAVL3Q14576 367 aaKnown RBP13.46□□□□□ -0.26
MSH5-202ENST00000375740 ADPRMQ3LIE5 342 aa13.46□□□□□ -0.26
MSH5-202ENST00000375740 MSANTD1Q6ZTZ1 278 aa13.46□□□□□ -0.26
MSH5-202ENST00000375740 CLEC4FQ8N1N0 589 aa13.46□□□□□ -0.26
MSH5-202ENST00000375740 KIAA1958Q8N8K9 716 aa13.46□□□□□ -0.26
MSH5-202ENST00000375740 NELL1Q92832 810 aa13.46□□□□□ -0.26
MSH5-202ENST00000375740 SMARCD2Q92925 531 aa13.46□□□□□ -0.26
MSH5-202ENST00000375740 ZNF486Q96H40 463 aaPredicted RBP13.46□□□□□ -0.26
MSH5-202ENST00000375740 PANX1Q96RD7 426 aa13.46□□□□□ -0.26
MSH5-202ENST00000375740 YTHDF1Q9BYJ9 559 aaKnown RBP13.46□□□□□ -0.26
MSH5-202ENST00000375740 TRIM39Q9HCM9 518 aa13.46□□□□□ -0.26
MSH5-202ENST00000375740 ENPP5Q9UJA9 477 aa13.46□□□□□ -0.26
MSH5-202ENST00000375740 BAG5Q9UL15 447 aa13.46□□□□□ -0.26
MSH5-202ENST00000375740 KCNE2Q9Y6J6 123 aa13.46□□□□□ -0.26
MSH5-202ENST00000375740 PTGES3LE9PB15 166 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 G3V2T6 193 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 YY2O15391 372 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 PRMT3O60678 531 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 NADKO95544 446 aaPredicted RBP13.45□□□□□ -0.26
MSH5-202ENST00000375740 TGFBR1P36897 503 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 TRPC1P48995 793 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 ARPC4P59998 168 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 RAE1P78406 368 aaKnown RBP13.45□□□□□ -0.26
MSH5-202ENST00000375740 PPP2R2DQ66LE6 453 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 FAM109BQ6ICB4 259 aaPredicted RBP13.45□□□□□ -0.26
MSH5-202ENST00000375740 PDE12Q6L8Q7 609 aaKnown RBP13.45□□□□□ -0.26
MSH5-202ENST00000375740 SLCO4C1Q6ZQN7 724 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 ZNF621Q6ZSS3 439 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 UBE2Q1Q7Z7E8 422 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 SYTL1Q8IYJ3 562 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 C1orf52Q8N6N3 182 aaKnown RBP13.45□□□□□ -0.26
MSH5-202ENST00000375740 OR10Q1Q8NGQ4 319 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms