RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 RADILQ96JH8 1075 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 ZSCAN5BA6NJL1 495 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 TBL1XO60907 577 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 ENGP17813 658 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 SLC10A7Q0GE19 358 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 RPA4Q13156 261 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 TECRLQ5HYJ1 363 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 RTL6Q6ICC9 239 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 CEP97Q8IW35 865 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 AQP11Q8NBQ7 271 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 OR4F6Q8NGB9 312 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 FAM198AQ9UFP1 575 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 KLHL21Q9UJP4 597 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 AMIGO1Q86WK6 493 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 COX18Q8N8Q8 333 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 RBM18Q96H35 190 aaKnown RBP9.88□□□□□ -0.83
PTCH1-204ENST00000375290 NPLQ9BXD5 320 aaPredicted RBP9.88□□□□□ -0.83
PTCH1-204ENST00000375290 ABCG5Q9H222 651 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 HYKKA2RU49 373 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 WDPCPO95876 746 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 ZNF823P16415 610 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 GRK5P34947 590 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 TAS2R31P59538 309 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 CYBRD1Q53TN4 286 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 SVBPQ8N300 66 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 WFIKKN2Q8TEU8 576 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 RGPD1P0DJD0 1748 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 RGS9O75916 674 aaPredicted RBP9.88□□□□□ -0.83
PTCH1-204ENST00000375290 KRT33AO76009 404 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 AHSGP02765 367 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 PLA2G16P53816 162 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 GJA9P57773 515 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 UGT3A2Q3SY77 523 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 RETREG3Q86VR2 466 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 UBE2J2Q8N2K1 259 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 GAB3Q8WWW8 586 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 MCMBPQ9BTE3 642 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 KLK4Q9Y5K2 254 aa9.88□□□□□ -0.83
PTCH1-204ENST00000375290 SPARCP09486 303 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 MXD1Q05195 221 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 ARMC10Q8N2F6 343 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 SPATA6LQ8N4H0 392 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 RHOXF1Q8NHV9 184 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 COL26A1Q96A83 441 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 PPM1BO75688 479 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 CSF1P09603 554 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 IFI30P13284 250 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 SLC41A3Q96GZ6 507 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 SMOXQ9NWM0 555 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 TVP23BQ9NYZ1 205 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 FARSAQ9Y285 508 aaKnown RBP9.87□□□□□ -0.83
PTCH1-204ENST00000375290 GXYLT2A0PJZ3 443 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 KRBA1A5PL33 1030 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 PRMT2P55345 433 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 PTCHD3Q3KNS1 767 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 WDR45BQ5MNZ6 344 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 HCAR2Q8TDS4 363 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 ARL11Q969Q4 196 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 SAV1Q9H4B6 383 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-204ENST00000375290 MN1Q10571 1320 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-204ENST00000375290 C1orf196B1AJZ1 125 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 SPATA31D3P0C874 917 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 KCNE1P15382 129 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 PKLRP30613 574 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 IRF4Q15306 451 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 SPATA31D4Q6ZUB0 917 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 USP50Q70EL3 339 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-204ENST00000375290 NXPE1Q8N323 547 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 OR2L5Q8NG80 312 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 TESCQ96BS2 214 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 OARD1Q9Y530 152 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 MT-ND1P03886 318 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 H2AFB2P0C5Z0 115 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 RBMS1P29558 406 aaKnown RBP9.87□□□□□ -0.83
PTCH1-204ENST00000375290 HTR2BP41595 481 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 ETV4P43268 484 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 GLT8D1Q68CQ7 371 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 LRP10Q7Z4F1 713 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 SLC15A3Q8IY34 581 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 REM2Q8IYK8 340 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-204ENST00000375290 BEST4Q8NFU0 473 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 OR7G1Q8NGA0 311 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 SUN3Q8TAQ9 357 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 GNPDA2Q8TDQ7 276 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 GPRC5BQ9NZH0 403 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 MED31Q9Y3C7 131 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 COL14A1Q05707 1796 aaKnown RBP9.87□□□□□ -0.83
PTCH1-204ENST00000375290 TCRBV3S1A0A5B6 114 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 ARNTLO00327 626 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 ADAMTS3O15072 1205 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 MMP20O60882 483 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 IFNA17P01571 189 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 MTHFD1P11586 935 aaKnown RBP9.87□□□□□ -0.83
PTCH1-204ENST00000375290 ZNF14P17017 642 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-204ENST00000375290 MMP12P39900 470 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 EN1Q05925 392 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-204ENST00000375290 FAM122CQ6P4D5 195 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 TREML1Q86YW5 311 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 MSANTD3Q96H12 275 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 LRCH3Q96II8 777 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms