RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 KDM4DQ6B0I6 523 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 RAET1GQ6H3X3 334 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 TANGO2Q6ICL3 276 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 VITQ6UXI7 678 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 SLCO4C1Q6ZQN7 724 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 MTSS1LQ765P7 747 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 PARS2Q7L3T8 475 aaKnown RBP11.77□□□□□ -0.52
UBR4-203ENST00000375225 TRAPPC5Q8IUR0 188 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 LAS2Q8IYD9 372 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 OXR1Q8N573 874 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 ATG16L2Q8NAA4 619 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 FBLIM1Q8WUP2 373 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 ELSPBP1Q96BH3 223 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 HSH2DQ96JZ2 352 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 MYADMQ96S97 322 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 DCUN1D5Q9BTE7 237 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 RIBC2Q9H4K1 309 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 TRIM39Q9HCM9 518 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 CCDC177Q9NQR7 707 aaPredicted RBP11.77□□□□□ -0.52
UBR4-203ENST00000375225 KRT84Q9NSB2 600 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 PDP1Q9P0J1 537 aaPredicted RBP11.77□□□□□ -0.52
UBR4-203ENST00000375225 SH3BP4Q9P0V3 963 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 FAM8A1Q9UBU6 413 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 NAALAD2Q9Y3Q0 740 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 PCDHGB3Q9Y5G1 929 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 PCDHGB1Q9Y5G3 927 aa11.77□□□□□ -0.52
UBR4-203ENST00000375225 KLHL33A6NCF5 533 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 ZNF99A8MXY4 864 aaPredicted RBP11.76□□□□□ -0.53
UBR4-203ENST00000375225 C1QTNF3-AMACRE9PGA6 284 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 PRAMEF4O60810 478 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 PFDN1O60925 122 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 SEMG1P04279 462 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 CTSLP07711 333 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 CISD3P0C7P0 127 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 LAMP1P11279 417 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 LAMP2P13473 410 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 BMP1P13497 986 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 IL7RP16871 459 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 JUNDP17535 347 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 POU3F3P20264 500 aaPredicted RBP11.76□□□□□ -0.53
UBR4-203ENST00000375225 CD22P20273 847 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 IGFBP4P22692 258 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 CXCR2P25025 360 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 GSTM5P46439 218 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 SERPINB10P48595 397 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 CTSCP53634 463 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 IST1P53990 364 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 RPS13P62277 151 aaKnown RBP11.76□□□□□ -0.53
UBR4-203ENST00000375225 TBPL1P62380 186 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 OCA2Q04671 838 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 NFATC3Q12968 1075 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 RPA4Q13156 261 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 CDK5R2Q13319 367 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 HKDC1Q2TB90 917 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 GCNT6Q5T4J0 391 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 PRAMEF9Q5VWM5 478 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 KIAA1614Q5VZ46 1190 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 TMEM215Q68D42 235 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 LINC00299Q6ZSB3 139 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 GPR155Q7Z3F1 870 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 TRMT11Q7Z4G4 463 aaKnown RBP11.76□□□□□ -0.53
UBR4-203ENST00000375225 TSPYL5Q86VY4 417 aaPredicted RBP11.76□□□□□ -0.53
UBR4-203ENST00000375225 CFAP206Q8IYR0 622 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 RAB42Q8N4Z0 105 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 TTC29Q8NA56 475 aaPredicted RBP11.76□□□□□ -0.53
UBR4-203ENST00000375225 GOT1L1Q8NHS2 421 aaPredicted RBP11.76□□□□□ -0.53
UBR4-203ENST00000375225 ZFP90Q8TF47 636 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 SLC5A11Q8WWX8 675 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 RORBQ92753 470 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 EZH1Q92800 747 aaPredicted RBP11.76□□□□□ -0.53
UBR4-203ENST00000375225 MUL1Q969V5 352 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 RAB7BQ96AH8 199 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 SH3KBP1Q96B97 665 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 PPCDCQ96CD2 204 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 C11orf24Q96F05 449 aaPredicted RBP11.76□□□□□ -0.53
UBR4-203ENST00000375225 ZFYVE19Q96K21 471 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 GAS2L1Q99501 681 aaPredicted RBP11.76□□□□□ -0.53
UBR4-203ENST00000375225 DOHHQ9BU89 302 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 SGPP1Q9BX95 441 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 CCDC90BQ9GZT6 254 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 LIN28AQ9H9Z2 209 aaKnown RBP11.76□□□□□ -0.53
UBR4-203ENST00000375225 MYNNQ9NPC7 610 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 TBCCD1Q9NVR7 557 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 DEC1Q9P2X7 70 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 TMEFF2Q9UIK5 374 aaPredicted RBP11.76□□□□□ -0.53
UBR4-203ENST00000375225 PADI2Q9Y2J8 665 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 MAGED1Q9Y5V3 778 aaPredicted RBP11.76□□□□□ -0.53
UBR4-203ENST00000375225 U3KQV3 271 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 SH3PXD2BA1X283 911 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 GABRR3A8MPY1 467 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 ATE1O95260 518 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 IDSP22304 550 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 KELP23276 732 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 IL1RL1Q01638 556 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 DLX2Q07687 328 aaPredicted RBP11.76□□□□□ -0.53
UBR4-203ENST00000375225 CAMK2GQ13555 558 aaPredicted RBP11.76□□□□□ -0.53
UBR4-203ENST00000375225 RUNX3Q13761 415 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 SLBPQ14493 270 aaKnown RBP eCLIP11.76□□□□□ -0.53
UBR4-203ENST00000375225 ELAVL3Q14576 367 aaKnown RBP11.76□□□□□ -0.53
UBR4-203ENST00000375225 STARD3Q14849 445 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms