RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 MED28Q9H204 178 aa18.89■□□□□ 0.61
TGFBR1-201ENST00000374990 HLA-DPB1P04440 258 aa18.89■□□□□ 0.61
TGFBR1-201ENST00000374990 SCRN2Q96FV2 425 aa18.89■□□□□ 0.61
TGFBR1-201ENST00000374990 TRIM8Q9BZR9 551 aa18.89■□□□□ 0.61
TGFBR1-201ENST00000374990 TSPAN6O43657 245 aa18.89■□□□□ 0.61
TGFBR1-201ENST00000374990 TOMM20Q15388 145 aa18.89■□□□□ 0.61
TGFBR1-201ENST00000374990 ABHD13Q7L211 337 aa18.89■□□□□ 0.61
TGFBR1-201ENST00000374990 KCNS3Q9BQ31 491 aa18.89■□□□□ 0.61
TGFBR1-201ENST00000374990 LIN28AQ9H9Z2 209 aaKnown RBP18.89■□□□□ 0.61
TGFBR1-201ENST00000374990 RNF6Q9Y252 685 aa18.89■□□□□ 0.61
TGFBR1-201ENST00000374990 MRPS17Q9Y2R5 130 aaKnown RBP18.89■□□□□ 0.61
TGFBR1-201ENST00000374990 CITO14578 2027 aa18.89■□□□□ 0.61
TGFBR1-201ENST00000374990 KLHL33A6NCF5 533 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 NME4O00746 187 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 PDYNP01213 254 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 CHRM1P11229 460 aaPredicted RBP18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 SLC15A1P46059 708 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 EIF4HQ15056 248 aaKnown RBP18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 C2orf27AQ580R0 203 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 COLEC12Q5KU26 742 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 ENPP7Q6UWV6 458 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 TRMT61BQ9BVS5 477 aaKnown RBP18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 COMMD3Q9UBI1 195 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 MYADML2A6NDP7 307 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 CHRM5P08912 532 aaPredicted RBP18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 RPS3P23396 243 aaKnown RBP eCLIP18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 CBARPQ8N350 705 aaPredicted RBP18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 AVL9Q8NBF6 648 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 PXYLP1Q8TE99 480 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 OR5P2Q8WZ92 322 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 NCSTNQ92542 709 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 SLC38A3Q99624 504 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 DOHHQ9BU89 302 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 MND1Q9BWT6 205 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 TREX1Q9NSU2 369 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 URB1O60287 2271 aaKnown RBP18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 GSTM4Q03013 218 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 METTL21AQ8WXB1 218 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 EMCNQ9ULC0 261 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 MAGEB3O15480 346 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 RAB33AQ14088 237 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 GRASPQ7Z6J2 395 aaPredicted RBP18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 TMEM130Q8N3G9 435 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 FBXO27Q8NI29 283 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 PTGDR2Q9Y5Y4 395 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 HSPE1-MOB4S4R3N1 261 aa18.88■□□□□ 0.61
TGFBR1-201ENST00000374990 NDUFS4O43181 175 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 UTP4Q969X6 686 aaKnown RBP18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 TP53INP1Q96A56 240 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 MMP27Q9H306 513 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 J3QRK9 145 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 AURKAO14965 403 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 RLN1P04808 185 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 SUOXP51687 545 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 ZNF789Q5FWF6 425 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 MEDAGQ5VYS4 303 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 TRNP1Q6NT89 227 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 FBXL8Q96CD0 374 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 NARS2Q96I59 477 aaKnown RBP18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 TNFRSF10DQ9UBN6 386 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 CCL5P13501 91 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 ALAS2P22557 587 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 UQCRC2P22695 453 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 STK19P49842 368 aaPredicted RBP18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 GALNT7Q86SF2 657 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 IQCHQ86VS3 1027 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 RNF130Q86XS8 419 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 YIPF4Q9BSR8 244 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 SLC22A4Q9H015 551 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 PCDHGA7Q9Y5G6 932 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 MYH9P35579 1960 aaKnown RBP18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 CAPN3P20807 821 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 ADAM17P78536 824 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 CARTPTQ16568 116 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 CNDP2Q96KP4 475 aaKnown RBP18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 ZDHHC7Q9NXF8 308 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 FBXL12Q9NXK8 326 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 FAM170BA6NMN3 283 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 MS4A2Q01362 244 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 ZNF598Q86UK7 904 aaKnown RBP18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 KCNN1Q92952 543 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 CDADC1Q9BWV3 514 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 SMOXQ9NWM0 555 aa18.87■□□□□ 0.61
TGFBR1-201ENST00000374990 GON4LQ3T8J9 2241 aa18.86■□□□□ 0.61
TGFBR1-201ENST00000374990 TMEM150CB9EJG8 249 aa18.86■□□□□ 0.61
TGFBR1-201ENST00000374990 ZNF182P17025 639 aaPredicted RBP18.86■□□□□ 0.61
TGFBR1-201ENST00000374990 DOC2AQ14183 400 aa18.86■□□□□ 0.61
TGFBR1-201ENST00000374990 SUSD1Q6UWL2 747 aa18.86■□□□□ 0.61
TGFBR1-201ENST00000374990 TMCO2Q7Z6W1 182 aaPredicted RBP18.86■□□□□ 0.61
TGFBR1-201ENST00000374990 KRTCAP2Q8N6L1 136 aa18.86■□□□□ 0.61
TGFBR1-201ENST00000374990 FIBINQ8TAL6 211 aa18.86■□□□□ 0.61
TGFBR1-201ENST00000374990 MOAP1Q96BY2 351 aa18.86■□□□□ 0.61
TGFBR1-201ENST00000374990 EFHD2Q96C19 240 aaPredicted RBP18.86■□□□□ 0.61
TGFBR1-201ENST00000374990 SLCO3A1Q9UIG8 710 aa18.86■□□□□ 0.61
TGFBR1-201ENST00000374990 C2orf78A6NCI8 922 aa18.86■□□□□ 0.61
TGFBR1-201ENST00000374990 BTN3A3O00478 584 aa18.86■□□□□ 0.61
TGFBR1-201ENST00000374990 GDI1P31150 447 aa18.86■□□□□ 0.61
TGFBR1-201ENST00000374990 ETV3P41162 512 aa18.86■□□□□ 0.61
TGFBR1-201ENST00000374990 ENTPD1P49961 510 aa18.86■□□□□ 0.61
TGFBR1-201ENST00000374990 SEC13P55735 322 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms