RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 HNRNPA1P09651 372 aaKnown RBP eCLIP7.53□□□□□ -1.2
HERC4-202ENST00000373700 ZDHHC11BP0C7U3 371 aa7.53□□□□□ -1.2
HERC4-202ENST00000373700 CD36P16671 472 aa7.53□□□□□ -1.2
HERC4-202ENST00000373700 TYRP1P17643 537 aa7.53□□□□□ -1.2
HERC4-202ENST00000373700 LHCGRP22888 699 aa7.53□□□□□ -1.2
HERC4-202ENST00000373700 RYKP34925 604 aa7.53□□□□□ -1.2
HERC4-202ENST00000373700 FEN1P39748 380 aaKnown RBP7.53□□□□□ -1.2
HERC4-202ENST00000373700 GSTM5P46439 218 aa7.53□□□□□ -1.2
HERC4-202ENST00000373700 RNF144AP50876 292 aaPredicted RBP7.53□□□□□ -1.2
HERC4-202ENST00000373700 UGT2B15P54855 530 aa7.53□□□□□ -1.2
HERC4-202ENST00000373700 RPL26P61254 145 aaKnown RBP7.53□□□□□ -1.2
HERC4-202ENST00000373700 VBP1P61758 197 aa7.53□□□□□ -1.2
HERC4-202ENST00000373700 SCARB2Q14108 478 aa7.53□□□□□ -1.2
HERC4-202ENST00000373700 TYSND1Q2T9J0 566 aa7.53□□□□□ -1.2
HERC4-202ENST00000373700 PRAMEF13Q5VWM6 474 aa7.53□□□□□ -1.2
HERC4-202ENST00000373700 ZNF783Q6ZMS7 281 aa7.53□□□□□ -1.2
HERC4-202ENST00000373700 CROCCP3Q8IVE0 287 aa7.53□□□□□ -1.2
HERC4-202ENST00000373700 PACRGLQ8N7B6 248 aa7.53□□□□□ -1.2
HERC4-202ENST00000373700 RLN3Q8WXF3 142 aa7.53□□□□□ -1.2
HERC4-202ENST00000373700 MACROD1Q9BQ69 325 aa7.53□□□□□ -1.2
HERC4-202ENST00000373700 FAIM2Q9BWQ8 316 aa7.53□□□□□ -1.2
HERC4-202ENST00000373700 SLC29A3Q9BZD2 475 aa7.53□□□□□ -1.2
HERC4-202ENST00000373700 TVP23BQ9NYZ1 205 aa7.53□□□□□ -1.2
HERC4-202ENST00000373700 CORO2BQ9UQ03 480 aa7.53□□□□□ -1.2
HERC4-202ENST00000373700 SPACA6W5XKT8 324 aa7.53□□□□□ -1.2
HERC4-202ENST00000373700 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.52□□□□□ -1.21
HERC4-202ENST00000373700 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.52□□□□□ -1.21
HERC4-202ENST00000373700 MAGEB3O15480 346 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 ZW10O43264 779 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 APOL3O95236 402 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 CCNDBP1O95273 360 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 MATN4O95460 622 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 IMPDH2P12268 514 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 BMP2P12643 396 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 ETFAP13804 333 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 HPGDP15428 266 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 AGXTP21549 392 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 PAICSP22234 425 aaKnown RBP7.52□□□□□ -1.21
HERC4-202ENST00000373700 JAK1P23458 1154 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 KDELR2P33947 212 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 FBXW4P57775 412 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 RPS3AP61247 264 aaKnown RBP7.52□□□□□ -1.21
HERC4-202ENST00000373700 TGM3Q08188 693 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 KLHL12Q53G59 568 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 CATSPEREQ5SY80 951 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 CEACAM20Q6UY09 585 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 HOMEZQ8IX15 550 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 NPAS3Q8IXF0 933 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 HUS1BQ8NHY5 278 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 TMEM203Q969S6 136 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 C1GALT1C1Q96EU7 318 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 ZNF607Q96SK3 696 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 ACPTQ9BZG2 426 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 TRIM39Q9HCM9 518 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 ABCB9Q9NP78 766 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 HEBP1Q9NRV9 189 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 MRPS7Q9Y2R9 242 aaKnown RBP7.52□□□□□ -1.21
HERC4-202ENST00000373700 STON1Q9Y6Q2 735 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 OR52A4PA6NMU1 304 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 ZNF99A8MXY4 864 aaPredicted RBP7.52□□□□□ -1.21
HERC4-202ENST00000373700 FAM25AB3EWG3 89 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 FAM25CB3EWG5 89 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 FAM25GB3EWG6 89 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 TARM1B6A8C7 271 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 GMFGO60234 142 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 PEX11BO96011 259 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 RPS6KA3P51812 740 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 CDK6Q00534 326 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 TARDBPQ13148 414 aaKnown RBP eCLIP7.52□□□□□ -1.21
HERC4-202ENST00000373700 CYBRD1Q53TN4 286 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 CLEC12AQ5QGZ9 265 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 C6orf141Q5SZD1 244 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 ASTLQ6HA08 431 aaPredicted RBP7.52□□□□□ -1.21
HERC4-202ENST00000373700 DEPDC4Q8N2C3 294 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 ANKFN1Q8N957 763 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 TMEM102Q8N9M5 508 aaPredicted RBP7.52□□□□□ -1.21
HERC4-202ENST00000373700 UBASH3BQ8TF42 649 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 BTN2A2Q8WVV5 523 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 CMTM7Q96FZ5 175 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 ERVK-18Q9QC07 812 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 OTOFQ9HC10 1997 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 TCRBV3S1A0A5B6 114 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 TRBC2A0A5B9 178 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 FEZF1A0PJY2 475 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 PRRT4C9JH25 899 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 KIAA0355O15063 1070 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 ADAMDEC1O15204 470 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 TBX1O43435 398 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 UGT2B17O75795 530 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 ADRB3P13945 408 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 TIMP2P16035 220 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 ZNF26P17031 533 aaPredicted RBP7.52□□□□□ -1.21
HERC4-202ENST00000373700 ZNF30P17039 623 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 CDH3P22223 829 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 IL12AP29459 219 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 DNAJA1P31689 397 aaKnown RBP7.52□□□□□ -1.21
HERC4-202ENST00000373700 RPL3P39023 403 aaKnown RBP7.52□□□□□ -1.21
HERC4-202ENST00000373700 TAS2R41P59536 307 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 MC1RQ01726 317 aa7.52□□□□□ -1.21
HERC4-202ENST00000373700 LSAMPQ13449 338 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms