RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 TRIM39Q9HCM9 518 aa22.9■■□□□ 1.26
CDK9-201ENST00000373264 RPS6KA6Q9UK32 745 aa22.9■■□□□ 1.26
CDK9-201ENST00000373264 CORINQ9Y5Q5 1042 aa22.9■■□□□ 1.26
CDK9-201ENST00000373264 TRANK1O15050 2925 aa22.9■■□□□ 1.26
CDK9-201ENST00000373264 INHBBP09529 407 aa22.89■■□□□ 1.26
CDK9-201ENST00000373264 MYOGP15173 224 aa22.89■■□□□ 1.26
CDK9-201ENST00000373264 ALDH4A1P30038 563 aa22.89■■□□□ 1.26
CDK9-201ENST00000373264 FBLIM1Q8WUP2 373 aa22.89■■□□□ 1.26
CDK9-201ENST00000373264 GABARAPL1Q9H0R8 117 aa22.89■■□□□ 1.26
CDK9-201ENST00000373264 MRPS23Q9Y3D9 190 aaKnown RBP22.89■■□□□ 1.26
CDK9-201ENST00000373264 GOLGA4Q13439 2230 aaKnown RBP22.89■■□□□ 1.26
CDK9-201ENST00000373264 DOCK9Q9BZ29 2069 aa22.89■■□□□ 1.25
CDK9-201ENST00000373264 C6P13671 934 aa22.89■■□□□ 1.25
CDK9-201ENST00000373264 FPR1P21462 350 aa22.89■■□□□ 1.25
CDK9-201ENST00000373264 GPR1P46091 355 aa22.89■■□□□ 1.25
CDK9-201ENST00000373264 BMXP51813 675 aa22.89■■□□□ 1.25
CDK9-201ENST00000373264 LSM3P62310 102 aaKnown RBP22.89■■□□□ 1.25
CDK9-201ENST00000373264 FAR1Q8WVX9 515 aa22.89■■□□□ 1.25
CDK9-201ENST00000373264 TDRKHQ9Y2W6 561 aaKnown RBP22.89■■□□□ 1.25
CDK9-201ENST00000373264 GMPPBQ9Y5P6 360 aa22.89■■□□□ 1.25
CDK9-201ENST00000373264 CFAP20Q9Y6A4 193 aaKnown RBP22.89■■□□□ 1.25
CDK9-201ENST00000373264 PIPSLA2A3N6 862 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 BCAS1O75363 584 aaPredicted RBP22.88■■□□□ 1.25
CDK9-201ENST00000373264 GABARAPL2P60520 117 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 TAP2Q03519 686 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 ZC3H12BQ5HYM0 836 aaKnown RBP22.88■■□□□ 1.25
CDK9-201ENST00000373264 CAPN13Q6MZZ7 669 aaPredicted RBP22.88■■□□□ 1.25
CDK9-201ENST00000373264 CCDC81Q6ZN84 652 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 PGBD3Q8N328 593 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 PLA2G15Q8NCC3 412 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 OR52J3Q8NH60 311 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 ZNF707Q96C28 371 aaPredicted RBP22.88■■□□□ 1.25
CDK9-201ENST00000373264 COQ8BQ96D53 544 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 MAGEB10Q96LZ2 347 aaPredicted RBP22.88■■□□□ 1.25
CDK9-201ENST00000373264 KIF17Q9P2E2 1029 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 TESMINQ9Y4I5 508 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 SNX5Q9Y5X3 404 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 KIAA1549LQ6ZVL6 1849 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 CARNS1A5YM72 827 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 C21orf58P58505 322 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 ST8SIA6P61647 398 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 FNDC3BQ53EP0 1204 aaKnown RBP22.88■■□□□ 1.25
CDK9-201ENST00000373264 C9orf64Q5T6V5 341 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 ERICH5Q6P6B1 374 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 NUS1Q96E22 293 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 KRT84Q9NSB2 600 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 TMEM9Q9P0T7 183 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 BTNL2Q9UIR0 455 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 BLOC1S6Q9UL45 172 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 PSME2Q9UL46 239 aa22.88■■□□□ 1.25
CDK9-201ENST00000373264 PRAMEF25A6NGN4 478 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 QSOX1O00391 747 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 FGBP02675 491 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 RRM2P31350 389 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 HPCAL1P37235 193 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 MASP1P48740 699 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 HNRNPFP52597 415 aaKnown RBP22.87■■□□□ 1.25
CDK9-201ENST00000373264 SPIN4Q56A73 249 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 DUS1LQ6P1R4 473 aaKnown RBP22.87■■□□□ 1.25
CDK9-201ENST00000373264 FAM124AQ86V42 546 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 FNDC8Q8TC99 324 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 NRBF2Q96F24 287 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 CNDP2Q96KP4 475 aaKnown RBP22.87■■□□□ 1.25
CDK9-201ENST00000373264 REEP1Q9H902 201 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 DMRT3Q9NQL9 472 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 TM7SF3Q9NS93 570 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 PCDHGA10Q9Y5H3 936 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 TLL1O43897 1013 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 POP7O75817 140 aaKnown RBP22.87■■□□□ 1.25
CDK9-201ENST00000373264 BCL10O95999 233 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 KLK1P06870 262 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 HSD3B1P14060 373 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 HSD3B2P26439 372 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 ARHGDIAP52565 204 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 ITGA1P56199 1179 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 NPTX1Q15818 432 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 RFX4Q33E94 735 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 GALNT18Q6P9A2 607 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 LRRC56Q8IYG6 542 aaPredicted RBP22.87■■□□□ 1.25
CDK9-201ENST00000373264 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.87■■□□□ 1.25
CDK9-201ENST00000373264 SPPL2AQ8TCT8 520 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 RAB2BQ8WUD1 216 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 NAALAD2Q9Y3Q0 740 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 CCDC88CQ9P219 2028 aa22.87■■□□□ 1.25
CDK9-201ENST00000373264 KLHL33A6NCF5 533 aa22.86■■□□□ 1.25
CDK9-201ENST00000373264 PFDN1O60925 122 aa22.86■■□□□ 1.25
CDK9-201ENST00000373264 ASMTP46597 345 aa22.86■■□□□ 1.25
CDK9-201ENST00000373264 TAS2R50P59544 299 aa22.86■■□□□ 1.25
CDK9-201ENST00000373264 DGCR6Q14129 220 aa22.86■■□□□ 1.25
CDK9-201ENST00000373264 GPR153Q6NV75 609 aa22.86■■□□□ 1.25
CDK9-201ENST00000373264 KLHDC8AQ8IYD2 350 aa22.86■■□□□ 1.25
CDK9-201ENST00000373264 SLC15A4Q8N697 577 aa22.86■■□□□ 1.25
CDK9-201ENST00000373264 OR5AR1Q8NGP9 310 aa22.86■■□□□ 1.25
CDK9-201ENST00000373264 BADQ92934 168 aa22.86■■□□□ 1.25
CDK9-201ENST00000373264 PRDM8Q9NQV8 689 aa22.86■■□□□ 1.25
CDK9-201ENST00000373264 RAD18Q9NS91 495 aa22.86■■□□□ 1.25
CDK9-201ENST00000373264 RLIMQ9NVW2 624 aa22.86■■□□□ 1.25
CDK9-201ENST00000373264 MAP4K5Q9Y4K4 846 aa22.86■■□□□ 1.25
CDK9-201ENST00000373264 SUV39H1O43463 412 aa22.86■■□□□ 1.25
CDK9-201ENST00000373264 VIPP01282 170 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms