RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 SNRNP27Q8WVK2 155 aaKnown RBP11.29□□□□□ -0.6
PDE6C-201ENST00000371447 GLMNQ92990 594 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 OSBPL10Q9BXB5 764 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 WBP1LQ9NX94 342 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 SNX11Q9Y5W9 270 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 ANKDD1BA6NHY2 528 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 M0QX08 132 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 NPC1O15118 1278 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 SCAMP2O15127 329 aaKnown RBP11.29□□□□□ -0.6
PDE6C-201ENST00000371447 MAGEB3O15480 346 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 TPST2O60704 377 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 AP2A2O94973 939 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 NFATC1O95644 943 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 VIPP01282 170 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 FABP3P05413 133 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 HPCAL1P37235 193 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 OR2T5Q6IEZ7 315 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 GRHL2Q6ISB3 625 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 PTOV1Q86YD1 416 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 DCP2Q8IU60 420 aaKnown RBP11.29□□□□□ -0.6
PDE6C-201ENST00000371447 ZZZ3Q8IYH5 903 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 ZCCHC7Q8N3Z6 543 aaKnown RBP11.29□□□□□ -0.6
PDE6C-201ENST00000371447 HDDC3Q8N4P3 179 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 OR2T29Q8NH02 315 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 UTP15Q8TED0 518 aaKnown RBP11.29□□□□□ -0.6
PDE6C-201ENST00000371447 RBM4BQ9BQ04 359 aaKnown RBP11.29□□□□□ -0.6
PDE6C-201ENST00000371447 YIPF4Q9BSR8 244 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 RBM4Q9BWF3 364 aaKnown RBP11.29□□□□□ -0.6
PDE6C-201ENST00000371447 RHBDL2Q9NX52 303 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 C3orf18Q9UK00 162 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 PADI4Q9UM07 663 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 CA5BQ9Y2D0 317 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 TRBV5-3A0A0A0MS03 114 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 INMTO95050 263 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 GDI1P31150 447 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 RRM2P31350 389 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 ALDH3B2P48448 385 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 NUDT6P53370 316 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 GBX1Q14549 363 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 NLGN4XQ8N0W4 816 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 TERB1Q8NA31 727 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 OR14C36Q8NHC7 312 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 SLC5A11Q8WWX8 675 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 SMARCD2Q92925 531 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 HSPBAP1Q96EW2 488 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 ASB16Q96NS5 453 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 FERD3LQ96RJ6 166 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 ZCCHC2Q9C0B9 1178 aaKnown RBP11.29□□□□□ -0.6
PDE6C-201ENST00000371447 LHPPQ9H008 270 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 KLHL25Q9H0H3 589 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 TMEM245Q9H330 911 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 REEP1Q9H902 201 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 CD320Q9NPF0 282 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 GPSM3Q9Y4H4 160 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 GMPPBQ9Y5P6 360 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 SNX5Q9Y5X3 404 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 TCF20Q9UGU0 1960 aaKnown RBP11.28□□□□□ -0.6
PDE6C-201ENST00000371447 FAM220BPB1ANY3 271 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 LINC01565O15544 149 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 SUV39H1O43463 412 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 KAT7O95251 611 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 CCNDBP1O95273 360 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 C1GALT1C1LP0DN25 315 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 CDK4P11802 303 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 IDSP22304 550 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 TIA1P31483 386 aaKnown RBP eCLIP11.28□□□□□ -0.6
PDE6C-201ENST00000371447 CDK9P50750 372 aaKnown RBP11.28□□□□□ -0.6
PDE6C-201ENST00000371447 PNLIPRP1P54315 467 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 CDH12P55289 794 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 ADRM1Q16186 407 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 SPDYE7PQ495Y7 208 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 ZBED5Q49AG3 693 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 KCTD21Q4G0X4 260 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 RPS26P11Q5JNZ5 115 aaPredicted RBP11.28□□□□□ -0.6
PDE6C-201ENST00000371447 PRAMEF14Q5SWL7 426 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 PRAMEF13Q5VWM6 474 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 TTC23Q5W5X9 447 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 TMIGD1Q6UXZ0 262 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 AADATQ8N5Z0 425 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 B4GALNT2Q8NHY0 566 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 TESCQ96BS2 214 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 PLA2G2FQ9BZM2 168 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 ROGDIQ9GZN7 287 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 KRT84Q9NSB2 600 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 SAMD4AQ9UPU9 718 aaKnown RBP11.28□□□□□ -0.6
PDE6C-201ENST00000371447 TMED5Q9Y3A6 229 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 PCDHGA4Q9Y5G9 962 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 SCN8AQ9UQD0 1980 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 EDDM13A0A1B0GTR0 161 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 FAM227AF5H4B4 570 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 J3QRK9 145 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 SLC16A5O15375 505 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 OR1F1O43749 312 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 SCN2BO60939 215 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 FADS2O95864 444 aaKnown RBP11.28□□□□□ -0.6
PDE6C-201ENST00000371447 PSMB9P28065 219 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 C6orf141Q5SZD1 244 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 CPZQ66K79 652 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 OR5K1Q8NHB7 308 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 GTPBP3Q969Y2 492 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms