RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 DEPDC7Q96QD5 511 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 C1orf50Q9BV19 199 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 EPB41L1Q9H4G0 881 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 AKIRIN1Q9H9L7 192 aaPredicted RBP6.76□□□□□ -1.33
USP1-202ENST00000371146 PRMT8Q9NR22 394 aaPredicted RBP6.76□□□□□ -1.33
USP1-202ENST00000371146 ADAMTS6Q9UKP5 1117 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 IGHV5-51A0A0C4DH38 117 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 CCDC163A0A0D9SF12 145 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 CDC14CA4D256 554 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 A6NJY4 79 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 C2orf74A8MZ97 194 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 OR10H2O60403 315 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 PDE5AO76074 875 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 COL6A2P12110 1019 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 CD59P13987 128 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 SERPINB4P48594 390 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 POLR2GP62487 172 aaKnown RBP eCLIP6.76□□□□□ -1.33
USP1-202ENST00000371146 HMGCS1Q01581 520 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 RCN2Q14257 317 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 POMZP3Q6PJE2 187 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 ABI3BPQ7Z7G0 1075 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 PLD6Q8N2A8 252 aaKnown RBP6.76□□□□□ -1.33
USP1-202ENST00000371146 AMER2Q8N7J2 671 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 RDH11Q8TC12 318 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.76□□□□□ -1.33
USP1-202ENST00000371146 TUBGCP3Q96CW5 907 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 ECHDC3Q96DC8 303 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 SECISBP2Q96T21 854 aaKnown RBP6.76□□□□□ -1.33
USP1-202ENST00000371146 SORBS1Q9BX66 1292 aaKnown RBP6.76□□□□□ -1.33
USP1-202ENST00000371146 BRINP2Q9C0B6 783 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.76□□□□□ -1.33
USP1-202ENST00000371146 RHOJQ9H4E5 214 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 IPPKQ9H8X2 491 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 GRHL1Q9NZI5 618 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 LRCH1Q9Y2L9 728 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 ST14Q9Y5Y6 855 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 MRPS18BQ9Y676 258 aaKnown RBP6.76□□□□□ -1.33
USP1-202ENST00000371146 DGKBQ9Y6T7 804 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 RGSL1A5PLK6 1076 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 TTLL8A6PVC2 850 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 ARHGEF33A8MVX0 844 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 CENPBD1B2RD01 187 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 H3BMM5 538 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 SGK494L7N484 410 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 PEX12O00623 359 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 RIPK2O43353 540 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 FZD6O60353 706 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 CHEK2O96017 543 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 LTA4HP09960 611 aaKnown RBP6.76□□□□□ -1.33
USP1-202ENST00000371146 MTHFD1P11586 935 aaKnown RBP6.76□□□□□ -1.33
USP1-202ENST00000371146 GPX6P59796 221 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 TBPL1P62380 186 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 B4GALNT1Q00973 533 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 LY6DQ14210 128 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 CHI3L2Q15782 390 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 SPRED3Q2MJR0 410 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 SPDYE7PQ495Y7 208 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 VWA2Q5GFL6 755 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 KHDRBS2Q5VWX1 349 aaKnown RBP6.76□□□□□ -1.33
USP1-202ENST00000371146 CPLX4Q7Z7G2 160 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 DCP2Q8IU60 420 aaKnown RBP6.76□□□□□ -1.33
USP1-202ENST00000371146 DCUN1D3Q8IWE4 304 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 SLC22A15Q8IZD6 547 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 CACNA2D3Q8IZS8 1091 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 NATD1Q8N6N6 113 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 TTC29Q8NA56 475 aaPredicted RBP6.76□□□□□ -1.33
USP1-202ENST00000371146 OR9A1PQ8NGU1 263 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 NSUN5Q96P11 429 aaKnown RBP6.76□□□□□ -1.33
USP1-202ENST00000371146 ZIM3Q96PE6 472 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 TRIB3Q96RU7 358 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 CPNE1Q99829 537 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 OR8D2Q9GZM6 311 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 SPRTNQ9H040 489 aaPredicted RBP6.76□□□□□ -1.33
USP1-202ENST00000371146 WDR41Q9HAD4 459 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 NMRAL1Q9HBL8 299 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 PTTG2Q9NZH5 202 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 PCOLCE2Q9UKZ9 415 aa6.76□□□□□ -1.33
USP1-202ENST00000371146 C17orf113A0A1B0GUU1 675 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 SYCE1LA8MT33 242 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 QSOX1O00391 747 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 KPNA5O15131 536 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 AP1G1O43747 822 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 SEC22BO75396 215 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 KRT6AP02538 564 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 KRT6BP04259 564 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 SLC35G6P0C7Q6 338 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 CSNK1DP48730 415 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 ARFIP2P53365 341 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 MRPS15P82914 257 aaKnown RBP6.75□□□□□ -1.33
USP1-202ENST00000371146 ASPHQ12797 758 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 GSTA3Q16772 222 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 RALGPS1Q5JS13 557 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 BNIPLQ7Z465 357 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 MMGT1Q8N4V1 131 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 NKAPQ8N5F7 415 aaKnown RBP6.75□□□□□ -1.33
USP1-202ENST00000371146 OR9A4Q8NGU2 314 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 SLC22A8Q8TCC7 542 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 KCNE4Q8WWG9 221 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 SPOCK2Q92563 424 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 SGK3Q96BR1 496 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms