RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 OR4K2Q8NGD2 314 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 PNPT1Q8TCS8 783 aaKnown RBP14.35□□□□□ -0.11
LMO4-201ENST00000370542 PKP2Q99959 881 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 TUBA1CQ9BQE3 449 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 FICDQ9BVA6 458 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 TRIM15Q9C019 465 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 ZNF385DQ9H6B1 395 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 COPS7BQ9H9Q2 264 aaPredicted RBP14.35□□□□□ -0.11
LMO4-201ENST00000370542 WDR41Q9HAD4 459 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 PLAC1Q9HBJ0 212 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 GIN1Q9NXP7 522 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 ANAPC2Q9UJX6 822 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 CROTQ9UKG9 612 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 CDYLQ9Y232 598 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 KCTD3Q9Y597 815 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 MRPS18BQ9Y676 258 aaKnown RBP14.35□□□□□ -0.11
LMO4-201ENST00000370542 KCNMB2Q9Y691 235 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 hCG_2014768A0A024R1R8 64 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 IGLV3-16A0A075B6K0 115 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 C17orf113A0A1B0GUU1 675 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 TLCD2A6NGC4 264 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 F5H423 210 aaPredicted RBP14.34□□□□□ -0.11
LMO4-201ENST00000370542 AIM2O14862 343 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 AVILO75366 819 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 ALDOAP04075 364 aaKnown RBP14.34□□□□□ -0.11
LMO4-201ENST00000370542 POLBP06746 335 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 FOLR1P15328 257 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 ZNF26P17031 533 aaPredicted RBP14.34□□□□□ -0.11
LMO4-201ENST00000370542 MSH3P20585 1137 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 PSMA3P25788 255 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 PSMB4P28070 264 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 DLSTP36957 453 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 RPL14P50914 215 aaKnown RBP14.34□□□□□ -0.11
LMO4-201ENST00000370542 ZNF140P52738 457 aaPredicted RBP14.34□□□□□ -0.11
LMO4-201ENST00000370542 OLIG2Q13516 323 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 IGFBP7Q16270 282 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 KCTD11Q693B1 232 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 HACD2Q6Y1H2 254 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 ZNF517Q6ZMY9 492 aaPredicted RBP14.34□□□□□ -0.11
LMO4-201ENST00000370542 AMIGO2Q86SJ2 522 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 TAB3Q8N5C8 712 aaPredicted RBP14.34□□□□□ -0.11
LMO4-201ENST00000370542 ANKFN1Q8N957 763 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 MINDY2Q8NBR6 621 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 SPATA13Q96N96 652 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 PPP1R2P1Q96PQ5 205 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 MAP3K3Q99759 626 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 ASB8Q9H765 288 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 KIR3DX1Q9H7L2 352 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 LHX9Q9NQ69 397 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 FKBPLQ9UIM3 349 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 KCND3Q9UK17 655 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 PADI1Q9ULC6 663 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 SEC16AO15027 2179 aa14.34□□□□□ -0.11
LMO4-201ENST00000370542 TRBV5-4A0A0C4DH59 114 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 MAGEB16A2A368 324 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 C21orf140B9A014 251 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 H7C0S8 307 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 ACOT8O14734 319 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 LDB2O43679 373 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 ZBTB14O43829 449 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 TIAF1O95411 115 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 FURINP09958 794 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 PRKAR1AP10644 381 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 COL6A2P12110 1019 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 CASRP41180 1078 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 PRLHRP49683 370 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 KPNA2P52292 529 aaKnown RBP14.33□□□□□ -0.12
LMO4-201ENST00000370542 ACY1Q03154 408 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 MOGQ16653 247 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 DEFB109BQ30KR1 87 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 C6orf52Q5T4I8 152 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 ATP1A1-AS1Q5TC04 95 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 PWWP2BQ6NUJ5 590 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 PPP4R4Q6NUP7 873 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 NIPAL1Q6NVV3 410 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 TRMT10BQ6PF06 316 aaKnown RBP14.33□□□□□ -0.12
LMO4-201ENST00000370542 FRA10AC1Q70Z53 315 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 ZNF534Q76KX8 674 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 GPR180Q86V85 440 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 RASGRP3Q8IV61 690 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 SIDT2Q8NBJ9 832 aaKnown RBP14.33□□□□□ -0.12
LMO4-201ENST00000370542 C9orf43Q8TAL5 461 aaPredicted RBP14.33□□□□□ -0.12
LMO4-201ENST00000370542 GIPC3Q8TF64 312 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 ABHD17AQ96GS6 310 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 DOK1Q99704 481 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 OLFM1Q99784 485 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 PDE7BQ9NP56 450 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 PLEKHB1Q9UF11 243 aaPredicted RBP14.33□□□□□ -0.12
LMO4-201ENST00000370542 RARRES3Q9UL19 164 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 BTRCQ9Y297 605 aa14.33□□□□□ -0.12
LMO4-201ENST00000370542 TRIM64A6NGJ6 449 aa14.32□□□□□ -0.12
LMO4-201ENST00000370542 CREG1O75629 220 aa14.32□□□□□ -0.12
LMO4-201ENST00000370542 CCNYL3P0C7X3 344 aa14.32□□□□□ -0.12
LMO4-201ENST00000370542 MSL3P1P0C860 447 aa14.32□□□□□ -0.12
LMO4-201ENST00000370542 PCSK6P29122 969 aa14.32□□□□□ -0.12
LMO4-201ENST00000370542 ERFP50548 548 aa14.32□□□□□ -0.12
LMO4-201ENST00000370542 HSD11B2P80365 405 aa14.32□□□□□ -0.12
LMO4-201ENST00000370542 TRIM25Q14258 630 aaKnown RBP14.32□□□□□ -0.12
LMO4-201ENST00000370542 GPR33Q49SQ1 333 aa14.32□□□□□ -0.12
LMO4-201ENST00000370542 INTS11Q5TA45 600 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms