RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 OR2M4Q96R27 311 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 TM9SF2Q99805 663 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 GPN1Q9HCN4 374 aaPredicted RBP12.48□□□□□ -0.41
PTPRK-207ENST00000368226 SDHAF3Q9NRP4 125 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 C11orf98E9PRG8 122 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 CDH15P55291 814 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 TIGD6Q17RP2 521 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 AURKBQ96GD4 344 aaPredicted RBP12.48□□□□□ -0.41
PTPRK-207ENST00000368226 TPT1P8Q9HAU6 139 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 HCFC1R1Q9NWW0 138 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 NOX1Q9Y5S8 564 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 RBM47A0AV96 593 aaKnown RBP12.48□□□□□ -0.41
PTPRK-207ENST00000368226 SH3D21A4FU49 640 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 H3BQ06 376 aaPredicted RBP12.48□□□□□ -0.41
PTPRK-207ENST00000368226 SCO2O43819 266 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 PDYNP01213 254 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 ACRV1P26436 265 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 ADNP2Q6IQ32 1131 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 AMIGO1Q86WK6 493 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 GEMIN6Q8WXD5 167 aaKnown RBP12.48□□□□□ -0.41
PTPRK-207ENST00000368226 KIAA1191Q96A73 305 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 BARD1Q99728 777 aaKnown RBP12.48□□□□□ -0.41
PTPRK-207ENST00000368226 MARK1Q9P0L2 795 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 GJD2Q9UKL4 321 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 GRIP1Q9Y3R0 1128 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 RPLP0P05388 317 aaKnown RBP12.48□□□□□ -0.41
PTPRK-207ENST00000368226 HOXB6P17509 224 aaKnown RBP12.48□□□□□ -0.41
PTPRK-207ENST00000368226 JUNDP17535 347 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 HSF2Q03933 536 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 NANOGNBQ7Z5D8 188 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 SYVN1Q86TM6 617 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 TSPAN33Q86UF1 283 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 TMEM25Q86YD3 366 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 NPAS3Q8IXF0 933 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 MGME1Q9BQP7 344 aa12.48□□□□□ -0.41
PTPRK-207ENST00000368226 C2orf92A0A1B0GVN3 265 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 ZNF99A8MXY4 864 aaPredicted RBP12.47□□□□□ -0.41
PTPRK-207ENST00000368226 GSK3BP49841 420 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 ELOCQ15369 112 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 NLGN4XQ8N0W4 816 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 FETUBQ9UGM5 382 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 GNG8Q9UK08 70 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 MRPL3P09001 348 aaKnown RBP12.47□□□□□ -0.41
PTPRK-207ENST00000368226 ZNF41P51814 821 aaPredicted RBP12.47□□□□□ -0.41
PTPRK-207ENST00000368226 NR0B1P51843 470 aaKnown RBP12.47□□□□□ -0.41
PTPRK-207ENST00000368226 CARD17Q5XLA6 110 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 KLHL36Q8N4N3 616 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 CCDC54Q8NEL0 328 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 KLHL6Q8WZ60 621 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 ARFGEF2Q9Y6D5 1785 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 LCHNA4D1U4 455 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 UNCXA6NJT0 531 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 MID1O15344 667 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 DNAJA1P31689 397 aaKnown RBP12.47□□□□□ -0.41
PTPRK-207ENST00000368226 MERTKQ12866 999 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 ASB18Q6ZVZ8 466 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 GLYATL1Q969I3 302 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 BORCS5Q969J3 196 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 SIGLEC10Q96LC7 697 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 ATXN10Q9UBB4 475 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 STOML2Q9UJZ1 356 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 A0A1W2PPL8 197 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 CNMDO75829 334 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 SERPINA3P01011 423 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 CD2P06729 351 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 EBLN1P0CF75 366 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 EPCAMP16422 314 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 HOXA11P31270 313 aaPredicted RBP12.47□□□□□ -0.41
PTPRK-207ENST00000368226 GBX2P52951 348 aaPredicted RBP12.47□□□□□ -0.41
PTPRK-207ENST00000368226 DIO3P55073 304 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 PER3P56645 1201 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 DEFB134Q4QY38 66 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 KLHL22Q53GT1 634 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 EPGNQ6UW88 154 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 ZNF611Q8N823 705 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 DMRTB1Q96MA1 342 aa12.47□□□□□ -0.41
PTPRK-207ENST00000368226 MARCH4Q9P2E8 410 aaPredicted RBP12.47□□□□□ -0.41
PTPRK-207ENST00000368226 EFCAB9A8MZ26 197 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 H0YGN5 161 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 VILLO15195 856 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 LRP8Q14114 963 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 OR4N5Q8IXE1 308 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 SMARCD2Q92925 531 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 PTCHD1Q96NR3 888 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 TUBGCP5Q96RT8 1024 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 C8orf4Q9NR00 106 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 DZANK1Q9NVP4 752 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 ZIM2Q9NZV7 527 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 FNIP2Q9P278 1114 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 PRAMEF33A0A0G2JMD5 474 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 C2orf74A8MZ97 194 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 PRAMEF10O60809 474 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 CCNKO75909 580 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 FAM163BP0C2L3 166 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 OR12D1P0DN82 309 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 AP2S1P53680 142 aaPredicted RBP12.46□□□□□ -0.41
PTPRK-207ENST00000368226 RASGEF1BQ0VAM2 473 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 DAG1Q14118 895 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 NPTX1Q15818 432 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 CLLU1OSQ5K130 101 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms