RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 AGRPO00253 132 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 NRG2O14511 850 aaPredicted RBP11.87□□□□□ -0.51
PTPN7-202ENST00000367279 LATS1O95835 1130 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 PDHA2P29803 388 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 SLC19A1P41440 591 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 TPTEP56180 551 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 KCNJ10P78508 379 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 ELP6Q0PNE2 266 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 CSTF3Q12996 717 aaKnown RBP11.87□□□□□ -0.51
PTPN7-202ENST00000367279 PPIGQ13427 754 aaKnown RBP eCLIP11.87□□□□□ -0.51
PTPN7-202ENST00000367279 EXOC3L2Q2M3D2 409 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 ZNF284Q2VY69 593 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 ARSIQ5FYB1 569 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 PLEKHG7Q6ZR37 379 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 RNF165Q6ZSG1 346 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 OR7G3Q8NG95 312 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 APH1BQ8WW43 257 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 IPCEF1Q8WWN9 437 aaPredicted RBP11.87□□□□□ -0.51
PTPN7-202ENST00000367279 SLC38A4Q969I6 547 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 HEPHQ9BQS7 1158 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 SLC35A5Q9BS91 424 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 TSEN34Q9BSV6 310 aaKnown RBP11.87□□□□□ -0.51
PTPN7-202ENST00000367279 WRAP53Q9BUR4 548 aaKnown RBP11.87□□□□□ -0.51
PTPN7-202ENST00000367279 RAB23Q9ULC3 237 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 HSPE1-MOB4S4R3N1 261 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 MKI67P46013 3256 aaKnown RBP11.87□□□□□ -0.51
PTPN7-202ENST00000367279 CCDC88CQ9P219 2028 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 OR2A25A4D2G3 310 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 GFYI3L273 518 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 DNTTP04053 509 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 HLA-EP13747 358 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 HOXB6P17509 224 aaKnown RBP11.87□□□□□ -0.51
PTPN7-202ENST00000367279 S100A5P33763 92 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 CSNK1DP48730 415 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 CXCR4P61073 352 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 POLR2LP62875 67 aaKnown RBP11.87□□□□□ -0.51
PTPN7-202ENST00000367279 C2orf80Q0P641 193 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 MED22Q15528 200 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 ZNF404Q494X3 552 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 ASTLQ6HA08 431 aaPredicted RBP11.87□□□□□ -0.51
PTPN7-202ENST00000367279 HEATR4Q86WZ0 1026 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 TAGAPQ8N103 731 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 SYNPOQ8N3V7 929 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 OR8J2Q8NGG1 315 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 FBLIM1Q8WUP2 373 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 MYDGFQ969H8 173 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 VMP1Q96GC9 406 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 FOPNLQ96NB1 174 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 SAMD11Q96NU1 681 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 NIPSNAP1Q9BPW8 284 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 OR51E2Q9H255 320 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 EXOSC4Q9NPD3 245 aaKnown RBP11.87□□□□□ -0.51
PTPN7-202ENST00000367279 FAM32AQ9Y421 112 aaKnown RBP11.87□□□□□ -0.51
PTPN7-202ENST00000367279 AGAP14A8MT82 685 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 A8MU76 341 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 TTC34A8MYJ7 566 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 ZNF197O14709 1029 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 KPNA5O15131 536 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 GRM6O15303 877 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 CCL16O15467 120 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 CD40LGP29965 261 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 CTSKP43235 329 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 RPS3AP61247 264 aaKnown RBP11.87□□□□□ -0.51
PTPN7-202ENST00000367279 CDKL4Q5MAI5 379 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 TMEM220Q6QAJ8 160 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 SLC43A3Q8NBI5 491 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 POP5Q969H6 163 aaKnown RBP11.87□□□□□ -0.51
PTPN7-202ENST00000367279 NEIL2Q969S2 332 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 OR4K3Q96R72 315 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 ACAT2Q9BWD1 397 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 ERVW-1Q9UQF0 538 aa11.87□□□□□ -0.51
PTPN7-202ENST00000367279 THSD7BQ9C0I4 1608 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 LEFTY1O75610 366 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 ALDH1A1P00352 501 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 GRK3P35626 688 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 HBA1P69905 142 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 SP140Q13342 867 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 RAB33AQ14088 237 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 SCARB2Q14108 478 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 ZNF385BQ569K4 471 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 ANXA8L1Q5VT79 327 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 SZRD1Q7Z422 152 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 WDR20Q8TBZ3 569 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 C7orf34Q96L11 122 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 Q96MT0 163 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 LYSMD1Q96S90 227 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 PKP4Q99569 1192 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 SLIRPQ9GZT3 109 aaKnown RBP11.86□□□□□ -0.51
PTPN7-202ENST00000367279 ITM2BQ9Y287 266 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 TSC22D4Q9Y3Q8 395 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 KCNE2Q9Y6J6 123 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 TLL1O43897 1013 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 TGFBR2P37173 567 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 ASMTP46597 345 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 IFI44LQ53G44 452 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 MSANTD1Q6ZTZ1 278 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 METTL3Q86U44 580 aaKnown RBP11.86□□□□□ -0.51
PTPN7-202ENST00000367279 RNF130Q86XS8 419 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 CCDC103Q8IW40 242 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 ZNF675Q8TD23 568 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms