RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 GBF1Q92538 1859 aa5.24□□□□□ -1.57
RNU4-39P-201ENST00000362455 CCDC171Q6TFL3 1326 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 RIF1Q5UIP0 2472 aaKnown RBP5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 CACNA1AO00555 2505 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 NEMP2A6NFY4 417 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 LACTBL1A8MY62 500 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 INO80B-WBP1J3KQ70 363 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 ZBTB5O15062 677 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 AP5Z1O43299 807 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 SMAD6O43541 496 aaKnown RBP5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 ATP9AO75110 1047 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 PDE9AO76083 593 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 PAPSS2O95340 614 aaPredicted RBP5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 PPP1R3DO95685 299 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 WDPCPO95876 746 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 IGHV2-70P01814 119 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 MMP1P03956 469 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 FAM58BPP0C7Q3 252 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 ADRA2CP18825 462 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 ATP5DP30049 168 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 FUT6P51993 359 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 RPL24P83731 157 aaKnown RBP5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 MFAP5Q13361 173 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 KIF19Q2TAC6 998 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 ASPRV1Q53RT3 343 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 ZRANB3Q5FWF4 1079 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 TCTE1Q5JU00 501 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 FAM91A1Q658Y4 838 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 C11orf88Q6PI97 169 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 MOXD1Q6UVY6 613 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 UNQ6126/PRO20091Q6UXV3 157 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 LINGO4Q6UY18 593 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 SPATA21Q7Z572 469 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 RBM23Q86U06 439 aaKnown RBP5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 IQCA1Q86XH1 822 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 FAM219AQ8IW50 185 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 ZNF611Q8N823 705 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 PPFIBP2Q8ND30 876 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 ATP8B4Q8TF62 1192 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 SUSD6Q92537 303 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 ESR2Q92731 530 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 ZBTB9Q96C00 473 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 STAMBPL1Q96FJ0 436 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 MED30Q96HR3 178 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 POLR3CQ9BUI4 534 aaPredicted RBP5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 UPF3BQ9BZI7 483 aaKnown RBP5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 VN1R1Q9GZP7 353 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 S1PR5Q9H228 398 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 B3GAT1Q9P2W7 334 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 BARX2Q9UMQ3 279 aaPredicted RBP5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 COL4A6Q14031 1691 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 PTPRSQ13332 1948 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 FRMPD4Q14CM0 1322 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 ADGRA3Q8IWK6 1321 aa5.23□□□□□ -1.57
RNU4-39P-201ENST00000362455 COL4A4P53420 1690 aaPredicted RBP5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 NCOR2Q9Y618 2525 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 GSTTP1A0A1W2PQM5 241 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 MBLAC1A4D2B0 266 aaPredicted RBP5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 ASPDHA6ND91 283 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 PRR32B1ATL7 298 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 FAM86B1E9PN63 330 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 H0YAE9 185 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 NTN1O95631 604 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 FAM86B2P0C5J1 330 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 SMIM18P0DKX4 95 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 PCP11498 1178 aaKnown RBP5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 PLA2G2AP14555 144 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 TCF4P15884 667 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 SP100P23497 879 aaPredicted RBP5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 PSMA3P25788 255 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 CCND2P30279 289 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 CD52P31358 61 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 THOP1P52888 689 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 ART1P52961 327 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 NAGLUP54802 743 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 UBASH3AP57075 661 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 NANOS2P60321 138 aaKnown RBP5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 MAT1AQ00266 395 aaKnown RBP5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 MBTD1Q05BQ5 628 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 COASYQ13057 564 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 BTG3Q14201 252 aaPredicted RBP5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 E2F5Q15329 346 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 SYT14P1Q58G82 188 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 C9orf57Q5W0N0 161 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 METTL7BQ6UX53 244 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 ZNF517Q6ZMY9 492 aaPredicted RBP5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 ASCL5Q7RTU5 278 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 C16orf82Q7Z2V1 217 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 NUP54Q7Z3B4 507 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 ARHGAP22Q7Z5H3 698 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 GPALPP1Q8IXQ4 340 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 CFAP206Q8IYR0 622 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 TRIML1Q8N9V2 468 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 DNAJB3Q8WWF6 145 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 DHX58Q96C10 678 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 C2orf40Q9H1Z8 148 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 FN3KQ9H479 309 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 COPS7BQ9H9Q2 264 aaPredicted RBP5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 FKRPQ9H9S5 495 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 SERINC1Q9NRX5 453 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms