RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 TESCQ96BS2 214 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 PSD2Q9BQI7 771 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 GABARAPL1Q9H0R8 117 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 KCTD5Q9NXV2 234 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 ZNF226Q9NYT6 803 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 NDUFAF4Q9P032 175 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 ANKMY1Q9P2S6 941 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 STOML2Q9UJZ1 356 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 YIPF1Q9Y548 306 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 DENND4AQ7Z401 1863 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 PABPN1LA6NDY0 278 aaKnown RBP10.19□□□□□ -0.78
SMC3-201ENST00000361804 TNFRSF11BO00300 401 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 SNPHO15079 494 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 HIST1H2AGP0C0S8 130 aaPredicted RBP10.19□□□□□ -0.78
SMC3-201ENST00000361804 ADORA3P0DMS8 318 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 HIST1H2ADP20671 130 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 NSG1P42857 185 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 PPP3CCP48454 512 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 CSNK1DP48730 415 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 RAE1P78406 368 aaKnown RBP10.19□□□□□ -0.78
SMC3-201ENST00000361804 ST3GAL4Q11206 333 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 INO80DQ53TQ3 878 aaPredicted RBP10.19□□□□□ -0.78
SMC3-201ENST00000361804 FAHD1Q6P587 224 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 DEFB128Q7Z7B8 93 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 TCAIMQ8N3R3 496 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 ZNF366Q8N895 744 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 ZNF675Q8TD23 568 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 ASB11Q8WXH4 323 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 HIST1H2AHQ96KK5 128 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 OR4K3Q96R72 315 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 SIGLEC11Q96RL6 698 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 HIST1H2AJQ99878 128 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 H2AFJQ9BTM1 129 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 DUSP26Q9BV47 211 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 EHD1Q9H4M9 534 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 ATP11BQ9Y2G3 1177 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 BOLA1Q9Y3E2 137 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 MAP4K5Q9Y4K4 846 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 LYVE1Q9Y5Y7 322 aa10.19□□□□□ -0.78
SMC3-201ENST00000361804 GNG14A0A1W2PPG7 69 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 AGAP5A6NIR3 686 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 WWP2O00308 870 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 C9P02748 559 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 PRPS2P11908 318 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 CKMT1AP12532 417 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 GPX2P18283 190 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 CTSKP43235 329 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 ITGA1P56199 1179 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 RPS26P62854 115 aaKnown RBP10.18□□□□□ -0.78
SMC3-201ENST00000361804 MED22Q15528 200 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 PRSS53Q2L4Q9 553 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 LRIT3Q3SXY7 679 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 TTLL9Q3SXZ7 439 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 ARMCX4Q5H9R4 360 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 DNAJB7Q7Z6W7 309 aaPredicted RBP10.18□□□□□ -0.78
SMC3-201ENST00000361804 SLC44A2Q8IWA5 706 aaPredicted RBP10.18□□□□□ -0.78
SMC3-201ENST00000361804 METTL4Q8N3J2 472 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 ATL1Q8WXF7 558 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 STARD8Q92502 1023 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 IL4I1Q96RQ9 567 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 TCF25Q9BQ70 676 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 CCM2Q9BSQ5 444 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 SORBS1Q9BX66 1292 aaKnown RBP10.18□□□□□ -0.78
SMC3-201ENST00000361804 SLC29A3Q9BZD2 475 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 IL21Q9HBE4 155 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 ASIC5Q9NY37 505 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 CKAP5Q14008 2032 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 PNMA8CA0A1B0GUJ8 204 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 SUV39H1O43463 412 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 LILRB3O75022 631 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 C1SP09871 688 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 BMPR1AP36894 532 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 SLC6A12P48065 614 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 ACSM2AQ08AH3 577 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 SMARCB1Q12824 385 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 PPIGQ13427 754 aaKnown RBP eCLIP10.18□□□□□ -0.78
SMC3-201ENST00000361804 ACSM2BQ68CK6 577 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 DNAJC22Q8N4W6 341 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 SORCS1Q8WY21 1168 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 ABCB8Q9NUT2 735 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 DNAJC11Q9NVH1 559 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 MS4A12Q9NXJ0 267 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 B4GALT6Q9UBX8 382 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 PSORS1C1Q9UIG5 152 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 EXO1Q9UQ84 846 aaKnown RBP10.18□□□□□ -0.78
SMC3-201ENST00000361804 TCF20Q9UGU0 1960 aaKnown RBP10.18□□□□□ -0.78
SMC3-201ENST00000361804 PRRG1O14668 218 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 SOX14O95416 240 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 ANXA4P09525 319 aaPredicted RBP10.18□□□□□ -0.78
SMC3-201ENST00000361804 IFITM2Q01629 132 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 IRF3Q14653 427 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 NXNL2Q5VZ03 156 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 Q6ZVU0 165 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 GDPD3Q7L5L3 318 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 OLIG3Q7RTU3 272 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 SYNPOQ8N3V7 929 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 SVOPQ8N4V2 548 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 OR10G2Q8NGC3 310 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 NFKBIDQ8NI38 313 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 ZDHHC3Q9NYG2 299 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms