RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 NRBF2Q96F24 287 aa15.23■□□□□ 0.03
PHTF1-201ENST00000357783 CCDC177Q9NQR7 707 aaPredicted RBP15.23■□□□□ 0.03
PHTF1-201ENST00000357783 DYRK4Q9NR20 520 aa15.23■□□□□ 0.03
PHTF1-201ENST00000357783 AASSQ9UDR5 926 aa15.23■□□□□ 0.03
PHTF1-201ENST00000357783 FAF1Q9UNN5 650 aaPredicted RBP15.23■□□□□ 0.03
PHTF1-201ENST00000357783 XPNPEP2O43895 674 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 PAPLNO95428 1278 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 NFATC1O95644 943 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 CD247P20963 164 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 FPR1P21462 350 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 GSTM2P28161 218 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 VEZF1Q14119 521 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 FBXO46Q6PJ61 603 aaPredicted RBP15.22■□□□□ 0.03
PHTF1-201ENST00000357783 ZNF765Q7L2R6 523 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 CIDECQ96AQ7 238 aaPredicted RBP15.22■□□□□ 0.03
PHTF1-201ENST00000357783 DGCR6LQ9BY27 220 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 REEP4Q9H6H4 257 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 PAK1IP1Q9NWT1 392 aaPredicted RBP15.22■□□□□ 0.03
PHTF1-201ENST00000357783 KIF17Q9P2E2 1029 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 NUMA1Q14980 2115 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 MUC22E2RYF6 1773 aaPredicted RBP15.22■□□□□ 0.03
PHTF1-201ENST00000357783 RNASET2O00584 256 aaKnown RBP15.22■□□□□ 0.03
PHTF1-201ENST00000357783 PPIBP23284 216 aaKnown RBP15.22■□□□□ 0.03
PHTF1-201ENST00000357783 CRATP43155 626 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 GABARAPL2P60520 117 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 HBA1P69905 142 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 CDK5R2Q13319 367 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 HIST2H2ACQ16777 129 aaPredicted RBP15.22■□□□□ 0.03
PHTF1-201ENST00000357783 COX20Q5RI15 118 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 HIST2H2AA3Q6FI13 130 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 GALNT18Q6P9A2 607 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 DHRS4L2Q6PKH6 230 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 NXPE4Q6UWF7 544 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 ADGRD2Q7Z7M1 963 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 CACUL1Q86Y37 369 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 LAS2Q8IYD9 372 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 LRRC56Q8IYG6 542 aaPredicted RBP15.22■□□□□ 0.03
PHTF1-201ENST00000357783 ZNF784Q8NCA9 323 aaPredicted RBP15.22■□□□□ 0.03
PHTF1-201ENST00000357783 PLA2G15Q8NCC3 412 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 TBC1D20Q96BZ9 403 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 THAP11Q96EK4 314 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 WDR34Q96EX3 536 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 PPP1R16AQ96I34 528 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 CCDC90BQ9GZT6 254 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 ITM2CQ9NQX7 267 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 MAPRE3Q9UPY8 281 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 CORO2BQ9UQ03 480 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 ASF1AQ9Y294 204 aa15.22■□□□□ 0.03
PHTF1-201ENST00000357783 C6orf47O95873 294 aa15.21■□□□□ 0.03
PHTF1-201ENST00000357783 CLK3P49761 638 aaKnown RBP15.21■□□□□ 0.03
PHTF1-201ENST00000357783 ENTPD1P49961 510 aa15.21■□□□□ 0.03
PHTF1-201ENST00000357783 EMP3P54852 163 aa15.21■□□□□ 0.03
PHTF1-201ENST00000357783 GRSF1Q12849 480 aaKnown RBP eCLIP15.21■□□□□ 0.03
PHTF1-201ENST00000357783 TOP3AQ13472 1001 aaPredicted RBP15.21■□□□□ 0.03
PHTF1-201ENST00000357783 KDM4DQ6B0I6 523 aa15.21■□□□□ 0.03
PHTF1-201ENST00000357783 CPA6Q8N4T0 437 aa15.21■□□□□ 0.03
PHTF1-201ENST00000357783 ACAT2Q9BWD1 397 aa15.21■□□□□ 0.03
PHTF1-201ENST00000357783 ZDHHC5Q9C0B5 715 aa15.21■□□□□ 0.03
PHTF1-201ENST00000357783 BHLHE41Q9C0J9 482 aaPredicted RBP15.21■□□□□ 0.03
PHTF1-201ENST00000357783 REEP1Q9H902 201 aa15.21■□□□□ 0.03
PHTF1-201ENST00000357783 THUMPD1Q9NXG2 353 aaKnown RBP15.21■□□□□ 0.03
PHTF1-201ENST00000357783 TMEM9Q9P0T7 183 aa15.21■□□□□ 0.03
PHTF1-201ENST00000357783 ZNF282Q9UDV7 671 aaPredicted RBP15.21■□□□□ 0.03
PHTF1-201ENST00000357783 ATP6V1HQ9UI12 483 aa15.21■□□□□ 0.03
PHTF1-201ENST00000357783 ACSL6Q9UKU0 697 aa15.21■□□□□ 0.03
PHTF1-201ENST00000357783 SNX5Q9Y5X3 404 aa15.21■□□□□ 0.03
PHTF1-201ENST00000357783 FOXE1O00358 373 aaPredicted RBP15.21■□□□□ 0.02
PHTF1-201ENST00000357783 SUV39H1O43463 412 aa15.21■□□□□ 0.02
PHTF1-201ENST00000357783 ETFAP13804 333 aa15.21■□□□□ 0.02
PHTF1-201ENST00000357783 ACADLP28330 430 aa15.21■□□□□ 0.02
PHTF1-201ENST00000357783 FMO3P31513 532 aa15.21■□□□□ 0.02
PHTF1-201ENST00000357783 RYKP34925 604 aa15.21■□□□□ 0.02
PHTF1-201ENST00000357783 PCGF2P35227 344 aa15.21■□□□□ 0.02
PHTF1-201ENST00000357783 PLA2G16P53816 162 aa15.21■□□□□ 0.02
PHTF1-201ENST00000357783 ITGA1P56199 1179 aa15.21■□□□□ 0.02
PHTF1-201ENST00000357783 C2orf80Q0P641 193 aa15.21■□□□□ 0.02
PHTF1-201ENST00000357783 IL18R1Q13478 541 aa15.21■□□□□ 0.02
PHTF1-201ENST00000357783 PSRC1Q6PGN9 363 aaPredicted RBP15.21■□□□□ 0.02
PHTF1-201ENST00000357783 ERN2Q76MJ5 926 aaKnown RBP15.21■□□□□ 0.02
PHTF1-201ENST00000357783 ATG16L2Q8NAA4 619 aa15.21■□□□□ 0.02
PHTF1-201ENST00000357783 C11orf65Q8NCR3 313 aa15.21■□□□□ 0.02
PHTF1-201ENST00000357783 OR5AR1Q8NGP9 310 aa15.21■□□□□ 0.02
PHTF1-201ENST00000357783 OR2L2Q8NH16 312 aa15.21■□□□□ 0.02
PHTF1-201ENST00000357783 CXorf40AQ8TE69 158 aa15.21■□□□□ 0.02
PHTF1-201ENST00000357783 ZNF514Q96K75 400 aaPredicted RBP15.21■□□□□ 0.02
PHTF1-201ENST00000357783 CNDP2Q96KP4 475 aaKnown RBP15.21■□□□□ 0.02
PHTF1-201ENST00000357783 NRTNQ99748 197 aa15.21■□□□□ 0.02
PHTF1-201ENST00000357783 SPATA9Q9BWV2 254 aa15.21■□□□□ 0.02
PHTF1-201ENST00000357783 SPASTQ9UBP0 616 aa15.21■□□□□ 0.02
PHTF1-201ENST00000357783 WARS2Q9UGM6 360 aaKnown RBP15.21■□□□□ 0.02
PHTF1-201ENST00000357783 TDRKHQ9Y2W6 561 aaKnown RBP15.21■□□□□ 0.02
PHTF1-201ENST00000357783 C2orf16Q68DN1 1984 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 UGT2B11O75310 529 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 ANGPTL1O95841 491 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 OPN1SWP03999 348 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 KLK1P06870 262 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 TAS2R50P59544 299 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 DPTQ07507 201 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 GTF2IRD2BQ6EKJ0 949 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 GTF2IRD2Q86UP8 949 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms