RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 SLIRPQ9GZT3 109 aaKnown RBP17.02■□□□□ 0.32
GYPC-202ENST00000356887 SMG9Q9H0W8 520 aaKnown RBP17.02■□□□□ 0.32
GYPC-202ENST00000356887 OSGIN1Q9UJX0 560 aa17.02■□□□□ 0.32
GYPC-202ENST00000356887 MAPRE3Q9UPY8 281 aa17.02■□□□□ 0.32
GYPC-202ENST00000356887 OR2AG2A6NM03 316 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 WASH3PC4AMC7 463 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 RRM2P31350 389 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 VIPR1P32241 457 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 DCDC1P59894 354 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 GAB1Q13480 694 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 HKDC1Q2TB90 917 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 CCSMST1Q4G0I0 132 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 ADNP2Q6IQ32 1131 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 NPAS3Q8IXF0 933 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 MED8Q96G25 268 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 VPS4AQ9UN37 437 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 CYP2A6P11509 494 aaPredicted RBP17.01■□□□□ 0.31
GYPC-202ENST00000356887 RXRGP48443 463 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 PXNP49023 591 aaPredicted RBP17.01■□□□□ 0.31
GYPC-202ENST00000356887 RPS3AP61247 264 aaKnown RBP17.01■□□□□ 0.31
GYPC-202ENST00000356887 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.01■□□□□ 0.31
GYPC-202ENST00000356887 Q6ZVL8 140 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 SNX29P2Q8IUI4 249 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 OR56A3Q8NH54 315 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 FOXJ1Q92949 421 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 SLC38A4Q969I6 547 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 KCNC2Q96PR1 638 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 SLC46A2Q9BY10 475 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 RUBCNLQ9H714 662 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 INIPQ9NRY2 104 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 PLCXD1Q9NUJ7 323 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 TMEM184CQ9NVA4 438 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 SPG21Q9NZD8 308 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 FAM8A1Q9UBU6 413 aa17.01■□□□□ 0.31
GYPC-202ENST00000356887 SH3BGRLO75368 114 aa17■□□□□ 0.31
GYPC-202ENST00000356887 VIPP01282 170 aa17■□□□□ 0.31
GYPC-202ENST00000356887 CTSAP10619 480 aa17■□□□□ 0.31
GYPC-202ENST00000356887 TGM1P22735 817 aa17■□□□□ 0.31
GYPC-202ENST00000356887 AQP1P29972 269 aa17■□□□□ 0.31
GYPC-202ENST00000356887 GGT2P36268 569 aa17■□□□□ 0.31
GYPC-202ENST00000356887 SELENOWP63302 87 aa17■□□□□ 0.31
GYPC-202ENST00000356887 TRIM60Q495X7 471 aa17■□□□□ 0.31
GYPC-202ENST00000356887 MLIPQ5VWP3 458 aa17■□□□□ 0.31
GYPC-202ENST00000356887 GPR153Q6NV75 609 aa17■□□□□ 0.31
GYPC-202ENST00000356887 BRAT1Q6PJG6 821 aa17■□□□□ 0.31
GYPC-202ENST00000356887 Q6ZPB1 254 aaPredicted RBP17■□□□□ 0.31
GYPC-202ENST00000356887 NANOGNBQ7Z5D8 188 aa17■□□□□ 0.31
GYPC-202ENST00000356887 TMEM25Q86YD3 366 aa17■□□□□ 0.31
GYPC-202ENST00000356887 TRAM1L1Q8N609 369 aa17■□□□□ 0.31
GYPC-202ENST00000356887 C11orf65Q8NCR3 313 aa17■□□□□ 0.31
GYPC-202ENST00000356887 OR7G3Q8NG95 312 aa17■□□□□ 0.31
GYPC-202ENST00000356887 OR2A12Q8NGT7 310 aa17■□□□□ 0.31
GYPC-202ENST00000356887 FCGR1BQ92637 280 aa17■□□□□ 0.31
GYPC-202ENST00000356887 TIFAQ96CG3 184 aa17■□□□□ 0.31
GYPC-202ENST00000356887 ZNF689Q96CS4 500 aaPredicted RBP17■□□□□ 0.31
GYPC-202ENST00000356887 ITPAQ9BY32 194 aa17■□□□□ 0.31
GYPC-202ENST00000356887 EPS8L2Q9H6S3 715 aa17■□□□□ 0.31
GYPC-202ENST00000356887 ATAD3AQ9NVI7 634 aa17■□□□□ 0.31
GYPC-202ENST00000356887 NDUFAF4Q9P032 175 aa17■□□□□ 0.31
GYPC-202ENST00000356887 PSORS1C1Q9UIG5 152 aa17■□□□□ 0.31
GYPC-202ENST00000356887 EXO1Q9UQ84 846 aaKnown RBP17■□□□□ 0.31
GYPC-202ENST00000356887 LYVE1Q9Y5Y7 322 aa17■□□□□ 0.31
GYPC-202ENST00000356887 A0A1W2PRU2 124 aa17■□□□□ 0.31
GYPC-202ENST00000356887 FADS2P1A8MWK0 482 aa17■□□□□ 0.31
GYPC-202ENST00000356887 EFCAB9A8MZ26 197 aa17■□□□□ 0.31
GYPC-202ENST00000356887 NPC1O15118 1278 aa17■□□□□ 0.31
GYPC-202ENST00000356887 PCDH7O60245 1069 aa17■□□□□ 0.31
GYPC-202ENST00000356887 NTRK1P04629 796 aa17■□□□□ 0.31
GYPC-202ENST00000356887 TGFBR1P36897 503 aa17■□□□□ 0.31
GYPC-202ENST00000356887 ETV3P41162 512 aa17■□□□□ 0.31
GYPC-202ENST00000356887 TEAD4Q15561 434 aa17■□□□□ 0.31
GYPC-202ENST00000356887 SPIN4Q56A73 249 aa17■□□□□ 0.31
GYPC-202ENST00000356887 PAGE2Q7Z2X7 111 aa17■□□□□ 0.31
GYPC-202ENST00000356887 RAVER1Q8IY67 606 aaKnown RBP17■□□□□ 0.31
GYPC-202ENST00000356887 HUS1BQ8NHY5 278 aa17■□□□□ 0.31
GYPC-202ENST00000356887 PKP4Q99569 1192 aa17■□□□□ 0.31
GYPC-202ENST00000356887 FEVQ99581 238 aa17■□□□□ 0.31
GYPC-202ENST00000356887 PSD2Q9BQI7 771 aa17■□□□□ 0.31
GYPC-202ENST00000356887 COPS4Q9BT78 406 aa17■□□□□ 0.31
GYPC-202ENST00000356887 RIOK2Q9BVS4 552 aaKnown RBP17■□□□□ 0.31
GYPC-202ENST00000356887 ANKHQ9HCJ1 492 aa17■□□□□ 0.31
GYPC-202ENST00000356887 ZNF282Q9UDV7 671 aaPredicted RBP17■□□□□ 0.31
GYPC-202ENST00000356887 MYOFQ9NZM1 2061 aa16.99■□□□□ 0.31
GYPC-202ENST00000356887 MGAT4DA6NG13 374 aa16.99■□□□□ 0.31
GYPC-202ENST00000356887 TNFRSF11BO00300 401 aa16.99■□□□□ 0.31
GYPC-202ENST00000356887 RNASET2O00584 256 aaKnown RBP16.99■□□□□ 0.31
GYPC-202ENST00000356887 TSPAN6O43657 245 aa16.99■□□□□ 0.31
GYPC-202ENST00000356887 LILRB3O75022 631 aa16.99■□□□□ 0.31
GYPC-202ENST00000356887 RFPL2O75678 378 aa16.99■□□□□ 0.31
GYPC-202ENST00000356887 CATP04040 527 aaKnown RBP16.99■□□□□ 0.31
GYPC-202ENST00000356887 S100A1P23297 94 aa16.99■□□□□ 0.31
GYPC-202ENST00000356887 IMPA1P29218 277 aa16.99■□□□□ 0.31
GYPC-202ENST00000356887 TIA1P31483 386 aaKnown RBP eCLIP16.99■□□□□ 0.31
GYPC-202ENST00000356887 BDKRB1P46663 353 aa16.99■□□□□ 0.31
GYPC-202ENST00000356887 PREPP48147 710 aa16.99■□□□□ 0.31
GYPC-202ENST00000356887 MVDP53602 400 aa16.99■□□□□ 0.31
GYPC-202ENST00000356887 ARPC4P59998 168 aa16.99■□□□□ 0.31
GYPC-202ENST00000356887 HENMT1Q5T8I9 393 aaKnown RBP16.99■□□□□ 0.31
GYPC-202ENST00000356887 ANKRD33Q7Z3H0 272 aa16.99■□□□□ 0.31
GYPC-202ENST00000356887 TMCO2Q7Z6W1 182 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms