RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 ABCB8Q9NUT2 735 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 LHX3Q9UBR4 397 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 GLYATL1P3A0A0U1RQE8 302 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 A0A1W2PQ09 198 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 EFCAB10A6NFE3 127 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 ETHE1O95571 254 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 TRBC1P01850 177 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 PRKCAP17252 672 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 ATF6P18850 670 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 HOXC8P31273 242 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 HOXC5Q00444 222 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 MGAT3Q09327 533 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 CXorf57Q6NSI4 855 aaKnown RBP9.77□□□□□ -0.85
PTPRA-203ENST00000356147 ZNF544Q6NX49 715 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 TUBA3EQ6PEY2 450 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 PAMR1Q6UXH9 720 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 CCDC190Q86UF4 302 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 SERINC5Q86VE9 423 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 TRPV1Q8NER1 839 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 MYO19Q96H55 970 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 COL21A1Q96P44 957 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 FAM193BQ96PV7 902 aaPredicted RBP9.77□□□□□ -0.85
PTPRA-203ENST00000356147 MCCC1Q96RQ3 725 aaPredicted RBP9.77□□□□□ -0.85
PTPRA-203ENST00000356147 P2RY13Q9BPV8 354 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 ASPNQ9BXN1 380 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 OLA1Q9NTK5 396 aaKnown RBP9.77□□□□□ -0.85
PTPRA-203ENST00000356147 DNAJC27Q9NZQ0 273 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 MALT1Q9UDY8 824 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 PCDHGB3Q9Y5G1 929 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 CHD5Q8TDI0 1954 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 RGS13O14921 159 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 COCHO43405 550 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 CLEC2LP0C7M8 214 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 PRPS2P11908 318 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 GPX2P18283 190 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 IL1RNP18510 177 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 CD22P20273 847 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 MAGEA11P43364 429 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 SNRPD2P62316 118 aaKnown RBP9.76□□□□□ -0.85
PTPRA-203ENST00000356147 TTLL9Q3SXZ7 439 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 SMUG1Q53HV7 270 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 IER5LQ5T953 404 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 FRG2Q64ET8 278 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 TAS1R1Q7RTX1 841 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 TMEM173Q86WV6 379 aaPredicted RBP9.76□□□□□ -0.85
PTPRA-203ENST00000356147 REM2Q8IYK8 340 aaPredicted RBP9.76□□□□□ -0.85
PTPRA-203ENST00000356147 SIX5Q8N196 739 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 CELF5Q8N6W0 485 aaKnown RBP9.76□□□□□ -0.85
PTPRA-203ENST00000356147 GPR26Q8NDV2 337 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 CHAC2Q8WUX2 184 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 FCGR1BQ92637 280 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 CLIP3Q96DZ5 547 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 FRG2BQ96QU4 278 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 OR2B2Q9GZK3 357 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 ABCB9Q9NP78 766 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 PCDHGA2Q9Y5H1 932 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 MEIOCA2RUB1 952 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 GABRR3A8MPY1 467 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 H7C0S8 307 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 KPNA5O15131 536 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 TBL1XO60907 577 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 EIF2S1P05198 315 aaKnown RBP9.76□□□□□ -0.85
PTPRA-203ENST00000356147 ACRV1P26436 265 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.76□□□□□ -0.85
PTPRA-203ENST00000356147 FAM209AQ5JX71 171 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 RTP2Q5QGT7 225 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 TRAF7Q6Q0C0 670 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 C11orf74Q86VG3 221 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 SLC34A3Q8N130 599 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 PIH1D2Q8WWB5 315 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 TESCQ96BS2 214 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 MED8Q96G25 268 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 FUBP3Q96I24 572 aaKnown RBP eCLIP9.76□□□□□ -0.852e-19■■■□□ 15.3
PTPRA-203ENST00000356147 DHRS1Q96LJ7 313 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 NXF2Q9GZY0 626 aaKnown RBP9.76□□□□□ -0.85
PTPRA-203ENST00000356147 SMURF1Q9HCE7 757 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 TRPV5Q9NQA5 729 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 DNMT3LQ9UJW3 386 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 MAP4K5Q9Y4K4 846 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 C2orf78A6NCI8 922 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 SMLR1H3BR10 107 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 CPNE3O75131 537 aaKnown RBP9.76□□□□□ -0.85
PTPRA-203ENST00000356147 CLDN11O75508 207 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 SNX4O95219 450 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 CHRNB1P11230 501 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 AOAHP28039 575 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 WEE1P30291 646 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 CNR2P34972 360 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 CSKP41240 450 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 CAV3P56539 151 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 IRF8Q02556 426 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 GPR50Q13585 617 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 PTGES3Q15185 160 aaKnown RBP9.76□□□□□ -0.85
PTPRA-203ENST00000356147 DGKKQ5KSL6 1271 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 PTCHD4Q6ZW05 846 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 RAB43Q86YS6 212 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 APCDD1Q8J025 514 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 CAMKK1Q8N5S9 505 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 C1orf52Q8N6N3 182 aaKnown RBP9.76□□□□□ -0.85
PTPRA-203ENST00000356147 NFKBIDQ8NI38 313 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms