RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 AUHQ13825 339 aaKnown RBP16.75■□□□□ 0.27
COL27A1-201ENST00000356083 PHC3Q8NDX5 983 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 SCAMP5Q8TAC9 235 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 DOK4Q8TEW6 326 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 PCDHB10Q9UN67 800 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 CFL2Q9Y281 166 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 A0A0G2JMP0 313 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 LAMTOR5O43504 91 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 MT-ND5P03915 603 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 ASLP04424 464 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 CCND3P30281 292 aaPredicted RBP16.75■□□□□ 0.27
COL27A1-201ENST00000356083 NTRK2Q16620 822 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 FIGNQ5HY92 759 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 EEF1DP3Q658K8 133 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 TIGD4Q8IY51 512 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 OR4M2Q8NGB6 313 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 HSPA12BQ96MM6 686 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 GPRC5BQ9NZH0 403 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 DOPEY2Q9Y3R5 2298 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 HLA-EP13747 358 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 TOMM5Q8N4H5 51 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 SMPD3Q9NY59 655 aaPredicted RBP16.75■□□□□ 0.27
COL27A1-201ENST00000356083 CNTN3Q9P232 1028 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 ATE1O95260 518 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 DDR1Q08345 913 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 ZNF423Q2M1K9 1284 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 GLYATL2Q8WU03 294 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 LENG8Q96PV6 779 aaPredicted RBP16.75■□□□□ 0.27
COL27A1-201ENST00000356083 CPXM1Q96SM3 734 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 RGCCQ9H4X1 137 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 CCNCP24863 283 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 NFKBIDQ8NI38 313 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 C12orf43Q96C57 262 aaKnown RBP16.75■□□□□ 0.27
COL27A1-201ENST00000356083 MYRFLQ96LU7 910 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 FUZQ9BT04 418 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 IKZF4Q9H2S9 585 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 MAGEE1Q9HCI5 957 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 OR2S2Q9NQN1 319 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 PDE10AQ9Y233 779 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 HCN4Q9Y3Q4 1203 aa16.75■□□□□ 0.27
COL27A1-201ENST00000356083 AHSA1O95433 338 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 F7P08709 466 aaPredicted RBP16.74■□□□□ 0.27
COL27A1-201ENST00000356083 ANXA3P12429 323 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 TSHRP16473 764 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 LASP1Q14847 261 aaKnown RBP16.74■□□□□ 0.27
COL27A1-201ENST00000356083 Q6ZVU0 165 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 VSIG10LQ86VR7 867 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 FAM71AQ8IYT1 594 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 SAMD14Q8IZD0 417 aaPredicted RBP16.74■□□□□ 0.27
COL27A1-201ENST00000356083 AQP11Q8NBQ7 271 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 TRIB2Q92519 343 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 C11orf49Q9H6J7 331 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 FZD4Q9ULV1 537 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 CDK5RAP2Q96SN8 1893 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 RPS24P62847 133 aaKnown RBP16.74■□□□□ 0.27
COL27A1-201ENST00000356083 RPL11P62913 178 aaKnown RBP16.74■□□□□ 0.27
COL27A1-201ENST00000356083 MALLQ13021 153 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 FAM221BA6H8Z2 402 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 SLC16A5O15375 505 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 SNX3O60493 162 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 RAB28P51157 221 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 RAB8AP61006 207 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 CAMK2DQ13557 499 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 FLYWCH1Q4VC44 716 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 USP53Q70EK8 1073 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 OR6N2Q8NGY6 317 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 LCKP06239 509 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 ADRA1BP35368 520 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 ARRB1P49407 418 aaPredicted RBP16.74■□□□□ 0.27
COL27A1-201ENST00000356083 ABRAXAS2Q15018 415 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 USP43Q70EL4 1123 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 HMGN2P46Q86SG4 172 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 GKN1Q9NS71 199 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 LOC102723532A0A0G2JNH3 316 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 OR51F1A6NGY5 319 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 YY2O15391 372 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 DIRAS1O95057 198 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 CSNK2A2P19784 350 aaPredicted RBP16.74■□□□□ 0.27
COL27A1-201ENST00000356083 CCNFP41002 786 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 RPS15P62841 145 aaKnown RBP16.74■□□□□ 0.27
COL27A1-201ENST00000356083 PPA1Q15181 289 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 ALDH16A1Q8IZ83 802 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 DENND1AQ8TEH3 1009 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 TAS2R10Q9NYW0 307 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 PCDHGA8Q9Y5G5 932 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 RPS14P62263 151 aaKnown RBP16.74■□□□□ 0.27
COL27A1-201ENST00000356083 MERTKQ12866 999 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 PRKD1Q15139 912 aaPredicted RBP16.74■□□□□ 0.27
COL27A1-201ENST00000356083 TMEM119Q4V9L6 283 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 STRADAQ7RTN6 431 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 ERI1Q8IV48 349 aaKnown RBP16.74■□□□□ 0.27
COL27A1-201ENST00000356083 LRRC52Q8N7C0 313 aa16.74■□□□□ 0.27
COL27A1-201ENST00000356083 ENTPD6O75354 484 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 EDN3P14138 238 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 GSTM2P28161 218 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 CRHR1P34998 444 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 ZNF781Q8N8C0 355 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 TBCCD1Q9NVR7 557 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 CDH22Q9UJ99 828 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 MYBPHLA2RUH7 354 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms