RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 BNIP2Q12982 314 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 EIF3IQ13347 325 aaKnown RBP7.91□□□□□ -1.14
CD44-205ENST00000352818 TRIM25Q14258 630 aaKnown RBP7.91□□□□□ -1.14
CD44-205ENST00000352818 RPS6KA2Q15349 733 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 CST6Q15828 149 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 C18orf21Q32NC0 220 aaPredicted RBP7.91□□□□□ -1.14
CD44-205ENST00000352818 ZNF658BQ4V348 819 aaPredicted RBP7.91□□□□□ -1.14
CD44-205ENST00000352818 FBXO48Q5FWF7 155 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 ZCCHC8Q6NZY4 707 aaKnown RBP7.91□□□□□ -1.14
CD44-205ENST00000352818 RETREG3Q86VR2 466 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 SFRP1Q8N474 314 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 DPP10Q8N608 796 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 EFCAB3Q8N7B9 438 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 PRR7Q8TB68 274 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 MCOLN3Q8TDD5 553 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 SLC26A7Q8TE54 656 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 GANCQ8TET4 914 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 ATL1Q8WXF7 558 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 SCAMP4Q969E2 229 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 PMEPA1Q969W9 287 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 ESAMQ96AP7 390 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 AP2M1Q96CW1 435 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 SPDL1Q96EA4 605 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 ZNF514Q96K75 400 aaPredicted RBP7.91□□□□□ -1.14
CD44-205ENST00000352818 HIST1H2AHQ96KK5 128 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 FAM129BQ96TA1 746 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 HIST1H2AJQ99878 128 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 CCDC3Q9BQI4 270 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 CCM2Q9BSQ5 444 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 H2AFJQ9BTM1 129 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 ARL15Q9NXU5 204 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 MAP10Q9P2G4 905 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 KLF15Q9UIH9 416 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 LEF1Q9UJU2 399 aaPredicted RBP7.91□□□□□ -1.14
CD44-205ENST00000352818 KCND3Q9UK17 655 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 NCKAP1Q9Y2A7 1128 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 LRCH1Q9Y2L9 728 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 LOXL2Q9Y4K0 774 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 CROCCQ5TZA2 2017 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 MN1Q10571 1320 aaPredicted RBP7.9□□□□□ -1.14
CD44-205ENST00000352818 A0A1W2PQM1 296 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 TCRBV3S1A0A5B6 114 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 ASPDHA6ND91 283 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 MANBAO00462 879 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 ANKRD28O15084 1053 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 CFLARO15519 480 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 AP1G1O43747 822 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 DNAJA2O60884 412 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 CLDN9O95484 217 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 SOD1P00441 154 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 KRT6AP02538 564 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 KRT6BP04259 564 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 ALPPL2P10696 532 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 ADRB3P13945 408 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 KRT6CP48668 564 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 POLR2JP52435 117 aaKnown RBP7.9□□□□□ -1.14
CD44-205ENST00000352818 MS4A2Q01362 244 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 PLOD1Q02809 727 aaPredicted RBP7.9□□□□□ -1.14
CD44-205ENST00000352818 HSPA14Q0VDF9 509 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 PRKG2Q13237 762 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 SPIDRQ14159 915 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 E2F2Q14209 437 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 ABRAXAS2Q15018 415 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 ACOX1Q15067 660 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 AGERQ15109 404 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 TLR1Q15399 786 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 NR6A1Q15406 480 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 FXNQ16595 210 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 C6orf10Q5SRN2 563 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 ATP1A1-AS1Q5TC04 95 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 OGFRL1Q5TC84 451 aaPredicted RBP7.9□□□□□ -1.14
CD44-205ENST00000352818 FAM219BQ5XKK7 198 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 SP5Q6BEB4 398 aaPredicted RBP7.9□□□□□ -1.14
CD44-205ENST00000352818 CYP20A1Q6UW02 462 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 RNF111Q6ZNA4 994 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 ERN2Q76MJ5 926 aaKnown RBP7.9□□□□□ -1.14
CD44-205ENST00000352818 SLC35F3Q8IY50 421 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 SLC22A15Q8IZD6 547 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 FAM9CQ8IZT9 166 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 PQLC1Q8N2U9 271 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 RASGEF1AQ8N9B8 481 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 FNDC5Q8NAU1 212 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 GLB1L3Q8NCI6 653 aaPredicted RBP7.9□□□□□ -1.14
CD44-205ENST00000352818 CATSPER1Q8NEC5 780 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 ZNF548Q8NEK5 533 aaPredicted RBP7.9□□□□□ -1.14
CD44-205ENST00000352818 BHLHE22Q8NFJ8 381 aaPredicted RBP7.9□□□□□ -1.14
CD44-205ENST00000352818 OR13H1Q8NG92 308 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 OR14C36Q8NHC7 312 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 PYDC1Q8WXC3 89 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 ELMO1Q92556 727 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 ATP6V1E2Q96A05 226 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 ZUFSPQ96AP4 578 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 FAM131CQ96AQ9 280 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 NUS1Q96E22 293 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 LINC00615Q96LM1 132 aaPredicted RBP7.9□□□□□ -1.14
CD44-205ENST00000352818 CDK15Q96Q40 435 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 ZNF184Q99676 751 aaPredicted RBP7.9□□□□□ -1.14
CD44-205ENST00000352818 DUSP23Q9BVJ7 150 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 TRIM15Q9C019 465 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 DYRK4Q9NR20 520 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms