RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 DDX53Q86TM3 631 aaKnown RBP9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 GPALPP1Q8IXQ4 340 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 LIX1Q8N485 282 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 CPA6Q8N4T0 437 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 C1orf52Q8N6N3 182 aaKnown RBP9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 DCBLD1Q8N8Z6 715 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 LPCAT1Q8NF37 534 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 OR4F6Q8NGB9 312 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 OR8H1Q8NGG4 311 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 ESAMQ96AP7 390 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 ZNF578Q96N58 590 aaPredicted RBP9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 OPALINQ96PE5 141 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 CNPPD1Q9BV87 410 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 RACGAP1Q9H0H5 632 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 AP5M1Q9H0R1 490 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 ZNF408Q9H9D4 720 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 PDFQ9HBH1 243 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 GPBP1L1Q9HC44 474 aaPredicted RBP9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 GABRQQ9UN88 632 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 PCDHGA2Q9Y5H1 932 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 CEP350Q5VT06 3117 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 GREB1Q4ZG55 1949 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 MEIS3P2A8K0S8 358 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 H7C0S8 307 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 OR7A17O14581 309 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 HCN1O60741 890 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 SLC43A1O75387 559 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 IGLV3-27P01718 113 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 SCG5P05408 212 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 FAM157BP0CG42 384 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 GLULP15104 373 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 PRKACAP17612 351 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 CFL1P23528 166 aaKnown RBP9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 GPC1P35052 558 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 RIN1Q13671 783 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 LARS2Q15031 903 aaKnown RBP9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 MED22Q15528 200 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 PTPRNQ16849 979 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 FAM110CQ1W6H9 321 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 HKDC1Q2TB90 917 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 ALFQ53S48 1182 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 FBXL22Q6P050 247 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 TEX261Q6UWH6 196 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 Q6ZPB1 254 aaPredicted RBP9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 GOLGA7Q7Z5G4 137 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 FAM124AQ86V42 546 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 OR10Z1Q8NGY1 313 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 NECTIN4Q96NY8 510 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 PSKH2Q96QS6 385 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 HBEGFQ99075 208 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 HTATIP2Q9BUP3 242 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 MAGEH1Q9H213 219 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 MIXL1Q9H2W2 232 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 TRIM45Q9H8W5 580 aaPredicted RBP9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 HHATLQ9HCP6 504 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 RBFOX1Q9NWB1 397 aaKnown RBP9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 CACNG4Q9UBN1 327 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 SEC14L4Q9UDX3 406 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 SRRDQ9UH36 339 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 FAM50BQ9Y247 325 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 CFAP20Q9Y6A4 193 aaKnown RBP9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 U3KQ87 197 aa9.96□□□□□ -0.81
CHRNA1-202ENST00000348749 SH3D21A4FU49 640 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 FABP12A6NFH5 140 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 WASHC1A8K0Z3 465 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 PITPNM1O00562 1244 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 INPPL1O15357 1258 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 NDUFA2O43678 99 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 ICAM2P13598 275 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 LPOP22079 712 aaPredicted RBP9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 KDELR2P33947 212 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 PTGER3P43115 390 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 BRCC3P46736 316 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 ARPP19P56211 112 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 RHAGQ02094 409 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 MRPL28Q13084 256 aaKnown RBP9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 KCNC3Q14003 757 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 PTCHD3Q3KNS1 767 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 MZT2BQ6NZ67 158 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 HSDL2Q6YN16 418 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 ANKS3Q6ZW76 656 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 MOB2Q70IA6 237 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 ZNF551Q7Z340 670 aaPredicted RBP9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 GLT6D1Q7Z4J2 308 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 PRSS42Q7Z5A4 293 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 VTCN1Q7Z7D3 282 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 TRIM69Q86WT6 500 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 CAMKK1Q8N5S9 505 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 CLDN22Q8N7P3 220 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 B3GNT7Q8NFL0 401 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 NPLOC4Q8TAT6 608 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 CD200R1Q8TD46 325 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 PMEPA1Q969W9 287 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 HSH2DQ96JZ2 352 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 SAMD11Q96NU1 681 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 C19orf43Q9BQ61 176 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 STUB1Q9UNE7 303 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 POFUT2Q9Y2G5 429 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 PCDHB1Q9Y5F3 818 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms